Athalia rosae (coleseed sawfly): 105693841 Help Entry 105693841         CDS       T09776                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism aroa  Athalia rosae (coleseed sawfly) Pathway aroa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:aroa00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     105693841  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aroa03019]     105693841 Enzymes [BR:aroa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      105693841 Messenger RNA biogenesis [BR:aroa03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      105693841 BRITE hierarchy Motif Pfam:  CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 AAA_22 MMR_HSR1 AAA_24 AAA_10 ATPase Motif Other DBs NCBI-GeneID:  105693841 NCBI-ProteinID:  XP_012269462 EnsemblRapid:  ENSAEAG00005010697 LinkDB All DBs Position 4:16967107..16968822 Genome browser AA seq 422 aa AA seqDB search MTEEKATTQEFKLDPDCELRFEVEQKNEKVTLELKSGLAEVFGTELVKGKKYEFSAGAKL AVFTWQGCVVELVGKTDVTYVAKETPMGVYLNCHAAMERMREAADKDDAVGPITMVVGPT DVGKSTFCKLLLNYAVRMGRRPVFVDLDVGQGEIAIPGTIGALLVERPSNIVEGFSQQAP LVFHFGYTKPNANTALYNLLVSRLAEVCSDRLQANKKARVSGIVINTCGWVKGLGYKFLT HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSKSLRTKSRDKRVRE YFYGFRTPLYPHSFEVKWSEARLYKVGAPVLPASCMPLGMKAEDNLTKLVAVTPGPHLLH HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD SH NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atgactgaagaaaaggctactacacaagagttcaaactcgaccccgactgtgaattgcgg ttcgaagttgagcagaaaaatgaaaaggtcacattggagctcaaaagcggtcttgcagag gtatttggtacagagctagtgaaaggaaaaaaatacgaattcagtgcaggagctaaactt gctgtttttacttggcaaggatgtgttgtagagcttgttggaaagactgacgtaacttat gtggccaaagaaacgccaatgggtgtttatctgaattgtcacgcagctatggaacgtatg cgagaagctgctgacaaggatgatgcagtagggcccataactatggttgtgggtccaacg gatgttggcaaatctacattctgtaaattactactcaactatgcagttcgaatgggacgt aggcccgtttttgttgatctggacgttggtcagggagaaatagcaattcctggaacaatt ggtgcactactcgttgaaagaccatctaatatagttgaggggttcagtcagcaggcacca ctagtctttcactttggatatactaaaccgaatgccaatactgcattgtataacctcttg gtatctagactcgcagaagtgtgttctgacagactacaagccaacaaaaaagccagagtc tcaggcattgttataaatacatgtggatgggtcaaaggactaggttataaattcctcaca catgctgctcaggcttttgaagtcgatgccatcctggtgctcgatcaagaaagactgtac aatgaacttgtcagagatatgccagactttgtaaaggtagttttcttgcctaaaagtggg ggtgttgttgaaagaagtaaatccctcagaacaaagtcaagggataaaagagttcgtgag tatttttacggcttcagaactccactctatccacacagttttgaagtcaaatggagcgaa gctaggctgtacaaagttggagctcccgtacttccagcatcatgcatgcctttgggaatg aaggctgaagataacttaactaaacttgttgcggtcacaccaggacctcacctactgcac cacttactttcagtatcatttgcagattcaccggaggatgatgttgtccagactaatgtg gctggcttcgtatgtgtaacaaacgtcgatgtcgaaaggcaaaccttcacggttctcagt ccacaacccaggcctttaccaaatactgtgctcctgctctcagatatacaatttatggat agccactaa

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