Amycolatopsis roodepoortensis: NQK81_20380
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Entry
NQK81_20380 CDS
T08507
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo00860
Porphyrin metabolism
aroo01100
Metabolic pathways
aroo01110
Biosynthesis of secondary metabolites
aroo01120
Microbial metabolism in diverse environments
aroo01240
Biosynthesis of cofactors
Module
aroo_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
aroo_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NQK81_20380 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aroo04147
]
NQK81_20380 (hemB)
Enzymes [BR:
aroo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
NQK81_20380 (hemB)
Exosome [BR:
aroo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NQK81_20380 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UUV35694
LinkDB
All DBs
Position
complement(4339849..4340820)
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AA seq
323 aa
AA seq
DB search
MFPEHRPRRLRTTPAMRRLVGETTLRPRQLILPMFVAEGIDTPRPISSMPGVVQHTRDTL
RKAAVDAVNAGVGGLMLFGIPKTRDAEGSGAIDPDGILNVALRDLRSELGDATVLMADTC
LDEFTDHGHCGVLDADGGVDNDATLRVYAEMGLAQAEAGAHLLGPSGMMDGQVGVIRAAL
DRAGRTDTGILAYSAKFASAFYGPFREAVDSQLKGDRKTYQQDPGNVREALREIELDIAE
GADMVMVKPALSYLDVIRAAAETSTVPVAAYNISGEYAMVEAAAANGWLDRERTILEVLT
SIRRAGADMILTYWAAEAAAWLD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgttccccgaacatcgtccccgcaggctccgtaccactccggccatgcgcaggctggtc
ggtgagacgacgctgcgcccgcgccagctgatccttcccatgttcgtggccgagggcatc
gacacgccccgcccgatctccagcatgcccggcgtcgtccagcacacccgcgacacgctg
cgcaaagccgccgtcgacgcggtcaacgccggggtcggcggcctgatgttgttcggcatc
ccgaagacgcgcgacgccgagggctccggcgcgatcgacccggacggcatcctcaacgtc
gccctgcgcgacctgaggtccgagctcggcgacgcgacggtcctgatggcggacacgtgt
ctcgacgagttcaccgatcacggccactgcggcgtcctcgacgccgacggcggtgtcgac
aacgacgcgaccctgcgcgtgtacgcggagatgggtctggcgcaggcggaagctggggcg
catctgctcggccccagcggcatgatggacggtcaggtcggcgtcatccgcgccgcgctc
gaccgcgccggccgtaccgacaccggcatcctcgcgtactcggcgaagttcgccagcgcg
ttctacggccccttccgcgaggccgtcgattcgcagctgaagggcgaccggaagacgtac
cagcaggatccgggcaacgtgcgtgaggcgctgcgcgagatcgagctggacatcgccgag
ggcgccgacatggtcatggtcaagcccgcgctgtcctatctggacgtcatcagggccgcc
gccgagacgtcgacggttcccgtcgcggcgtacaacatctcgggggagtacgcgatggtc
gaggccgccgcggcgaacggctggctcgaccgcgagcgcacgatcctcgaggtgctgacc
tcgatccgccgcgccggcgcggacatgatcctgacctactgggccgccgaagccgcagct
tggctggactag
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