Arcobacter roscoffensis: NJU99_04480
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Entry
NJU99_04480 CDS
T09051
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aros
Arcobacter roscoffensis
Pathway
aros00540
Lipopolysaccharide biosynthesis
aros01100
Metabolic pathways
aros01250
Biosynthesis of nucleotide sugars
Module
aros_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NJU99_04480 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aros01005
]
NJU99_04480 (rfaD)
Enzymes [BR:
aros01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NJU99_04480 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aros01005
]
Core region
NJU99_04480 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
DUF4223
Motif
Other DBs
NCBI-ProteinID:
UTJ07352
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Position
922002..923003
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AA seq
333 aa
AA seq
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MKYTNIDFNNKTILITGAAGFIGSNLCFYFQQNYPNASIIAFDCFRSNDKFSNGNPKSFG
HYENLLGFKGIVISGDINDKQALQNLEKNYSFDYIFHQAAISDTTVLEQYIMIKTNVNAY
EDLLKIAIKHKANMIYASSAATYGNSSKFEVGYESPNNAYGFSKVMMDNITYEYLKKDLD
IQIVGLKYFNVYGPREFHKGKTSSMVIQFAHQILRGEIPRLFERSDEILRDFIYIEDVIQ
ANIKACTPKKSGVFNVGTSKPKSFEDIVNILQELLKTPKKKEYIKNPYIGSYQFFTQANI
ETTKKYLDYEPRYSLEEGIKEYLPQIKESLKTK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacacaaatatagattttaataataaaactattttaatcacaggagcagcaggc
tttataggttcaaatctttgcttttattttcaacaaaactatccaaatgcaagcatcata
gcctttgattgttttagatcaaatgataagttttcaaatggaaatccaaaaagctttggg
cactatgaaaacttattaggttttaaaggcattgttataagtggggatataaatgataaa
caggctttacaaaacttagagaaaaactatagttttgattatatttttcatcaagctgct
atttctgatactactgttttagaacaatatattatgataaaaacaaatgtaaatgcctat
gaagatttattaaaaatcgccataaaacataaggcaaatatgatttatgcaagttcagct
gcaacttatggaaatagttctaagtttgaagtaggatatgaatccccaaataatgcctat
ggtttttcaaaagtaatgatggacaatatcacttatgagtacctaaagaaagatttagat
attcaaattgtgggcttaaagtattttaatgtatacggaccaagagagtttcataaagga
aaaacatcttctatggtaatacaatttgcccatcaaatactaagaggtgaaataccaagg
ttatttgaaagaagtgatgagatactaagagattttatttatatagaagatgtaattcaa
gctaatataaaagcttgtactcctaaaaaatcaggagttttcaatgtaggaacttcaaaa
ccaaaaagctttgaagacattgtaaatattttgcaagagttattaaaaactcctaagaaa
aaagagtatataaaaaatccctatataggttcatatcagttttttacacaagcaaatatt
gagactacaaaaaagtatttagattatgaaccaagatattctttagaagagggtataaaa
gagtatttacctcaaataaaagagtctttaaagacaaaataa
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