Apteryx rowi (Okarito brown kiwi): 112970039
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Entry
112970039 CDS
T07573
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow00310
Lysine degradation
arow01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112970039 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112970039 (PRDM2)
03036 Chromosome and associated proteins [BR:
arow03036
]
112970039 (PRDM2)
Enzymes [BR:
arow01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112970039 (PRDM2)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112970039 (PRDM2)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112970039 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-H2C2_2
zf-C2H2_11
PyrI_C
zf-MYST
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112970039
NCBI-ProteinID:
XP_025929770
Ensembl:
ENSARWG00000013299
LinkDB
All DBs
Position
Unknown
AA seq
1493 aa
AA seq
DB search
MRDSKEGHKEEDEKPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTNESQIVTEDTQGA
AINCGSDDLDDDDEEDDEDEEDEEEIEDANMPKEDAEMPLICEEKLDSMEEQKSMSEESP
ESSPKRKLVVKIPKAKDESNGDVQETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFK
CRYCGKAFGTQINRRRHERRHEAGPRRKPFLTLTSSQHLDNVGDNQVIVDDGFKDDLNVS
SLVQDPVVLDSEKISQEISNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERH
LIPKGVRRKGFFPEEPQLQTEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNY
YIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISQNLKVAQTHVNEPPKEPT
SSGSNESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPLSISTENLTFHKEKSIYLSSK
LKQLLQTQDTKKITPSSEIPKLGPSVTSPPILPPVSSRFKRRTSSPPSSPQHSPVLRDFV
KSGEGKTVWNDSIRSSKMPKLESHSNSPVWSLTGREERETMSPLCFEDYKISKDWAAAPT
FGNVCNQQPLDLSSGVKQRCDVKNKNQVPWESVLDLSVHKKPCSDAEIREYKENNSIQPT
CSGIKKKKPTTCMLQKVLLNEYNGMDAAMDSAPSANRSPSPSKSSEPQAEPDMDPSLFAS
SVDTQTLSSSVSPVPQTSVPSMCQLPPLLTPTNPPSPPPCPPVLTVAMSPPPLLPTIPLP
IPDVSTSATNTSSCPSPLSNTTAQSPLPVLSPTVSPSPSPVPSVEPSASPGPPTLSSSSS
SSSSSSFSSSSSSPSPPPLSVVSSVVSSTDNLENTLPIIKQEETDNEQKAREDPQTSSES
GIVQETFNKSFVCNVCESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFRDKTDLSEHRFL
LHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVE
HMQSLPEDSLDPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPP
PFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDK
KRYTPKKNPVPLKQTVQPKNGMVVITGPGKNAFRRMGQPKRLNFNVEISKMSSNKLKISA
LKKKNQLVQKAILQKKKSAQQKAELKNNPSESDSHICPYCNREFTYIGSLNKHASYSCPK
KPISPSSKKNSSKKSASSSLPASTEKGNNQRRRTADAEIKMQSMQAHLGKTRARTSGPAQ
IQLPSASFKSKQNVKFVPPIRSKKPNSSSSLRNSSPVRVSKMTHVEGKKTKVVAKNSSSG
ISSKASRKLHVRIQRNNKAVLPSKSTMASKKKADRFSVKSRERIGGPITRSLQQAANAEA
AENKRDESSTKQELKDFSYRLRMASRCPSSSSHNTSTRQCKKSSCTTAHFFKE
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgagggattcaaaagagggtcataaggaggaagatgaaaaaccttctgtttctgctgtg
ctttccctggaacaaacggctgtgattcaggaaatggtaaatcaagatgtacttccaaag
ctgatgatccccagtcccaccaatgagtcacaaatagtaactgaagacacccaaggagca
gcaataaactgtggatcagatgatttggatgacgatgatgaagaggatgatgaagatgag
gaagatgaagaggagatagaagatgccaatatgcctaaagaggatgctgaaatgccttta
atatgtgaagaaaagttagactctatggaagagcaaaagagtatgtcagaagaatctcca
gaaagctctccaaagagaaagcttgttgtgaaaattccaaaagcaaaagatgaatcaaat
ggtgacgtccaggaaacattcatgtttccttgtcagcattgtgagaggaagtttacaaca
aagcaaggacttgaacgccacatgcacatccatatatctactgttaaccatgctttcaaa
tgtcggtattgtgggaaggcttttggtacgcaaattaacaggcgaagacatgaacggcgt
catgaggcagggccaagaaggaaaccgttcttaaccctaacgtcatcacaacacctggat
aatgttggtgataaccaagtaattgtggatgatggttttaaagacgacttgaatgtttcc
agtcttgtgcaagatcccgtagtcttggattctgagaaaatctcacaagaaatttcaaac
tctgcttttgctgaagaaaataaggaacccaaagaattgcatccatgcaaatactgcaaa
aaggtttttggaactcataccaacatgcggaggcatcagcgtagggttcatgagcgtcat
cttattcccaaaggtgtcagaagaaaaggattctttcctgaagagccacaacttcaaact
gagcaggccccaccagtccagagtgtgtacatagcaagcacggaaatagaagaggaaggt
gaagtggatgatgtttatattatggatatttccagcaatatctctgaaaacttaaattat
tacattgatggtaaaattcagtccaacagcagcactagcaattgtgatgtgattcagatg
gagtctaactctgcagacttgtatggactaaattgtataatcagtccggtcacagtggaa
atttcccaaaatttaaaggttgcgcaaacgcatgtgaatgaacctcctaaggagcccacc
agcagtgggagcaatgaatccaaaaagaggagaacagctagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagagaacttaacttttcataaagaaaaaagtatttatttgtcatcaaaa
ttaaaacagcttcttcagacacaggatactaagaagataactccatcaagtgaaatccct
aaactaggaccttctgttacatcaccacctattttgcctccagtatctagcagattcaaa
agaaggaccagctctcctcccagctctccgcagcatagtccagtacttcgagactttgtc
aaatcaggtgagggaaaaactgtgtggaatgatagtattcggagttcaaaaatgccaaag
ttagaaagccacagcaactcacctgtgtggagcttgactggaagggaagaaagagagact
atgagccctctgtgctttgaagactataaaatatctaaagactgggcagcagctccgacc
tttggcaatgtgtgcaaccagcagccactggatttatctagtggtgtaaaacaaagatgt
gatgtgaaaaataagaatcaggttccttgggaatctgtattagatttaagtgtgcataag
aagccttgtagtgatgctgaaattagggagtataaagaaaataattccatacagccaacc
tgtagtggtattaaaaagaagaaaccaaccacttgcatgttgcaaaaggttctgctgaat
gagtataacggaatggatgcagctatggacagtgcccccagtgcgaacagaagcccaagc
ccaagtaaatcatcagaacctcaggcagaacctgacatggatcccagtctatttgcatct
tctgttgacactcagacccttagttcctctgtttcccctgtgccacagacatctgtacct
tcaatgtgccagctgcctcctttgttgacaccaacaaatcctccttccccaccaccctgc
ccacctgtgttaacagttgctatgtcgcctcctccccttcttcccacaataccgttacca
attccagatgtctccaccagtgccactaacacatcatcttgcccatcaccactctctaac
actactgcccagtccccactacctgttctttcacctacagtttctccttctccatctcct
gttccttctgttgaaccttctgcctcacctggtcctcctactctttcctcttcctcttct
tcctcctcttcttcctctttctcttcatcatcatcatctccatctccacctcctctttca
gtagtttcttctgttgtttcctctactgataatcttgaaaatactctcccaataataaag
caggaagaaactgataatgaacaaaaggcaagagaagatcctcaaacttcaagtgaatca
ggaatagtgcaggaaacgttcaataaaagctttgtgtgcaatgtttgtgaatcacctttt
ctttccattaaagacctaactaagcatttatctgttcatgctgaagaatggcccttcaaa
tgtgaattctgtgtacagctttttagggataaaacagacttgtcagaacatcgctttctg
cttcatggagtaggaaatatctttgtttgttcagtctgtaaaaaggaatttgcttttttg
tgcaatttgcaacagcatcagcgagatctccatccagacaaagaatgcacgcatcatgag
tttgagagtgggactttgagaccccagaatttcactgaccccagcaaggcaaacgtagaa
cacatgcagagcctcccagaagattctttagacccttctaaagaggaggaagatgaagat
ctaaatgattcctctgaagagctgtatactactataaaaataatggcttctggggtaaaa
tctaaagatccagatgttcgtatgggcctaaatcaacactatccaagctttaaaccacct
ccatttcagtatcaccatcgtaatcctatgggtattggagttactgcgacaaatttcact
acccacaatatcccacagacctttactactgccattcgttgcacaaaatgtggaaaaagt
gttgataatatgcccgagttacacaaacacatattggcatgtgcgtctgccagtgataaa
aagagatacacacccaaaaaaaatccagtaccactgaaacagacagtgcagcctaaaaat
ggcatggtggttataactggccctggaaagaatgccttcagaagaatgggtcagcctaaa
agacttaatttcaatgttgagataagcaaaatgtcctcaaataaactaaaaataagtgca
ttgaaaaagaaaaaccaacttgtccagaaagctatcttgcaaaaaaagaaatctgcacag
cagaaggcggaattgaaaaataatccatccgagtcagactctcacatctgcccctactgt
aatagagaatttacttatattggaagtttgaacaaacatgcatcatatagctgtcccaaa
aaacccatttctccatcctctaaaaaaaattcatcaaaaaaaagtgcaagttcttcattg
cctgcaagcactgaaaaaggcaacaaccagcgtaggcgaacagcggatgcagaaatcaaa
atgcaaagcatgcaggctcacttgggcaagacaagagcacgaacctcaggacctgcgcaa
attcagctgccctctgcgtccttcaaatcaaaacaaaatgttaaatttgtacctccaatt
cgatctaaaaagccaaattcatcttcatcattgaggaactctagtcctgtaagagtgtcc
aaaatgactcatgttgaagggaaaaaaactaaagtggtagctaagaacagttcctccgga
atctcaagcaaggcatcccggaaattgcatgtcagaatacaaaggaataataaagctgtt
ttgccaagtaagtctactatggcaagtaagaaaaaagcagacaggttcagtgtaaaatct
agagaaaggattggaggacctattacacgaagcttgcagcaggcagctaatgcagaggca
gcagaaaacaaaagagatgaaagcagtacaaagcaagagctaaaagatttcagttacagg
ctccgcatggcctctagatgtccctcctcctcttcgcataacaccagcaccaggcaatgc
aagaaatccagctgcactacagcccacttcttcaaggaatag
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integrated database retrieval system
