Apteryx rowi (Okarito brown kiwi): 112972215
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Entry
112972215 CDS
T07573
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04010
MAPK signaling pathway
arow04210
Apoptosis
arow04218
Cellular senescence
arow04620
Toll-like receptor signaling pathway
arow04621
NOD-like receptor signaling pathway
arow04622
RIG-I-like receptor signaling pathway
arow04623
Cytosolic DNA-sensing pathway
arow04625
C-type lectin receptor signaling pathway
arow04920
Adipocytokine signaling pathway
arow05132
Salmonella infection
arow05164
Influenza A
arow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112972215 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112972215 (NFKB1)
04218 Cellular senescence
112972215 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112972215 (NFKB1)
04621 NOD-like receptor signaling pathway
112972215 (NFKB1)
04622 RIG-I-like receptor signaling pathway
112972215 (NFKB1)
04623 Cytosolic DNA-sensing pathway
112972215 (NFKB1)
04625 C-type lectin receptor signaling pathway
112972215 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
112972215 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112972215 (NFKB1)
05168 Herpes simplex virus 1 infection
112972215 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
112972215 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112972215 (NFKB1)
Transcription factors [BR:
arow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
112972215 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
HTH_27
Motif
Other DBs
NCBI-GeneID:
112972215
NCBI-ProteinID:
XP_025934196
Ensembl:
ENSARWG00000017601
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFTMDQFMGMNAIFNNTSYITSDLPLRTATSGVCIASLQSATADG
PYLQIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVT
NGKYVHLHAHSLVGKFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLEARMIDAC
KKGYNPGLLVHPELGYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLP
DSNGSFTRKLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQ
IRFYEEDENGGMWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLET
SEPKPFLYYPEIKDKEEVQRKRQKLMPNFSDGYGGGGGTGGGGGMYGGGGGGAGSGFSYP
SYGYSAFGGMHFHPGTTKSNAGMKHGLSNTTAEQDGESSDTHSDKWDVEHEVKVETVERK
DCRTSGDNEEEEEDGTSSFKAEVNEADYRLQDGLFLEKAMQLARRHANALFDYAVTGDVK
MLLAVQRHLTVVQDDNGDNVLHLAIIHLHTELVKNLLEVVPDLNCSDVINMRNDLYQTPL
HLAVITKQADVVEDLLTAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMVDL
SNGEGLSAIHMVVMANSVSCLRQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLL
EGDADVDSTTYDGTTPLHIAAGRGSTKLAALLKAAGANPHIENFEPLFDLEDVKDDDEGI
VPGTTPLDMAANCEVYDILNGKPYESAVVSEDLLTQGHMRELNESSKMQLYKLLEAPDPN
KNWSTLAQKLGLGILNNAFRLSPSPSKTLLDNYEVSGGTIQELIAALRQMGYTEAVEVIQ
KALSISQSQSHQEDSTVEALPSPSPPSSTKGQTGELYNSKFQDNESMCDSGVETSFRKLS
FTYSESLNSKSSITLSKITLGYGHESSVQSKI
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccaaatgtttacaatggat
cagttcatgggaatgaatgcaatatttaataatacaagttacatcacttcagacttacca
ctacgaacagcaacctctggtgtttgtattgccagtttgcagagtgcaacagcagacgga
ccatatcttcaaatcatagaacagcctaaacagagaggttttcgtttccgatacgtatgt
gaggggccttcacatggtggacttcctggtgcttctagtgaaaagaacaaaaaatcatac
cctcaggtcaaaatctgcaattatgttggacctgcaaaagtaattgtccagttagttact
aatgggaaatatgtccacttgcacgctcacagcctggtgggtaaattttgtgaagatgga
gtatgcacggttaacgcaggacctaaagatatggttgtagggtttgcgaacctgggaata
cttcacgtcacaaagaagaaagtgtttgaaactctggaagcrcgcatgatagatgcttgc
aaaaaaggctacaaccctggcctcctggtgcatcctgaacttggctatttgcaggcagaa
ggatgtggagacagacagctaactgagcgagaaagagaaatcattcgtcaggcagcagta
cagcagactaaagaaatggatctcagtgtggtgcgtcttatgtttacagcctttctccct
gacagtaatggtagtttcacccggaaacttgatcctgttatatcagatgcaatatatgac
agcaaagctcccaatgcttccaacttaaaaattgtacgaatggacagaacggcagggtgc
gtaacaggcggggaagagatttaccttctctgtgacaaggttcagaaagatgatattcaa
atacgtttctatgaagaggatgagaatggtggtatgtgggaaggctttggagacttttct
cctacagatgtacatcgacagttcgctattgtgttcaaaacacccaagtacagagatgtc
aatatcacaaagccggcgtctgtgtttgtacaactgcggcggaaatctgatctagaaaca
agtgaaccaaagccttttctctactacccagaaatcaaagataaagaagaagtgcaaagg
aaacgccagaagctcatgccgaacttctctgatggctatggtggaggtggcggcacagga
ggcggcggcggcatgtatggaggtggcggtggcggtgctggctctggattcagttatcct
tcctatggatactctgcatttggagggatgcatttccaccctggcacaacaaagtccaat
gctggaatgaaacatggactatcaaataccacagctgaacaagacggggagagctctgat
acacacagtgacaaatgggatgtggaacatgaggtgaaagtggaaactgtagagaggaaa
gactgcagaacctctggtgataatgaggaggaggaagaggatggtacttcatcctttaaa
gctgaagtaaatgaagcagattacaggttgcaggacggtctgttcctggagaaggccatg
cagcttgccaggcgtcatgccaatgctctcttcgattacgctgtaaccggagatgtgaag
atgctgttggctgttcagcgccatctcactgttgtccaggacgacaacggagacaacgtc
cttcatttagcaattatccaccttcatactgagctggtgaaaaacctcttagaagtggtg
ccagatctgaactgtagtgacgttatcaacatgagaaatgacctttatcagacccccttg
cacttggcagtcatcacaaagcaggctgatgtggtagaagacttgcttacggctggagca
gatgtcagccttctggatcgacatggtaattctgtcttgcatttagctgctactgaagga
gacgacaagattttgagtctactccttaagcataagaagatatctccgatggttgacctt
tctaatggtgaaggtctcagtgcaattcacatggtggtgatggcaaatagcgtgtcctgt
ctcagacaactgattgctgctggagttaacgtcaacgctcaggaacagaaatctggacga
actgcattgcatttggctgttgaacaagagaacatccctttggcaggctgccttttgctt
gagggtgatgcagatgtggacagcactacatatgatggaacaactcctcttcacatagcg
gctggaaggggctctacaaaactggcagcactcctcaaagcagcaggtgcaaatcctcat
attgagaattttgagccattgtttgatctagaggatgtaaaagatgacgatgaaggaatt
gtgcctggaacgacaccactggatatggcggccaactgtgaggtgtatgacatattaaat
ggcaaaccctatgagtcagcagtggtttcagaggacttactgacacaaggacatatgaga
gagctgaatgaaagctccaagatgcagctttacaaactgttagaagcacctgatccaaac
aaaaactggtctaccctagcacaaaaactgggtcttggcatacttaacaacgctttcagg
ttgagcccttccccatcgaaaactctgctagataactacgaggtttctggtggtacaatt
caagagctgatcgctgctttgagacaaatgggttacacagaagccgttgaagtcattcag
aaagcactatccatctcacaaagccagtctcaccaggaggacagcacagtagaagctctt
ccctcaccatcaccaccctcttccacaaaaggacagacaggtgaactttataatagcaaa
tttcaagacaatgaaagcatgtgtgacagtggtgtggagacctccttccgcaaactgagc
tttacttattccgagtctctgaacagcaagtcatcaataacacttagcaaaattaccctg
ggctatggacatgaaagttcagtgcaaagtaaaatatag
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