Agrobacterium rubi: G6M88_06630
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Entry
G6M88_06630 CDS
T08058
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
arui
Agrobacterium rubi
Pathway
arui00020
Citrate cycle (TCA cycle)
arui00785
Lipoic acid metabolism
arui01100
Metabolic pathways
arui01110
Biosynthesis of secondary metabolites
arui01120
Microbial metabolism in diverse environments
arui01200
Carbon metabolism
arui01210
2-Oxocarboxylic acid metabolism
Module
arui_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arui_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G6M88_06630
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G6M88_06630
Enzymes [BR:
arui01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
G6M88_06630
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QTG00087
LinkDB
All DBs
Position
1:complement(1399272..1402268)
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AA seq
998 aa
AA seq
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MARQEANEQFSITSFLDGANAAYIEQLYARYEEDPSSVSPEWQSFFKGLSDNPEDVKAAA
KGASWKRSNWPIAANGDLISALDGNWATVEKAIEKKVQAKAEAKGAETGKTVSEAEVLRA
TRDSVRAIMMIRAYRMRGHLHAKLDPLGIASAVEDYDELSPKSYGFEESDYDRKIFIDNV
LGLEYATVREMIEILERTYCSTLGVEFMHMSSPEEKGWIQERIEGQDKGVAFTAEGKKAI
LSKLIEGEGYEQFLDVRFKGTKRFGLDGSESLIPALEQIIKRGGQEGLEEVVLGMAHRGR
LNVLTNVMGKPHRAVFHEFKGGSFKPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQLAKAWDGDTIPLSERAKVLPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTMHVIINNQIGFTTNPGFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEYRMKFHKPVVIDMFCYRRFGHNEGDEPSFTQPKMYKVIRAHKTVANIYAERLI
AEGLLTEGEFEKMKADWRAHLEQEFEAGQSYKPNKADWLDGQWSGLRAADNADEQRRGKT
GAPMKQLKEIGRKLSTIPEGFKAHKTIQRFMENRAQMIETGEGLDWAMAEAMAFGSLVVD
GHKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLAPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
TSSLTELGGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVLCTGKVYYDLLEEREKRGI
DDVYLLRIEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQKVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaagaagccaacgagcagttttcgatcacgtcgtttctagacggcgcgaat
gcagcctatatcgagcagctctatgcccggtatgaggaggatccatcctccgtgtcgcca
gaatggcagagcttcttcaaggggctttccgacaatcccgaagacgtgaaggctgcggcg
aagggtgcttcctggaagcgctccaactggccgattgcggccaatggcgatctgatttcg
gcgctggatggcaactgggccaccgtcgaaaaggcaatcgaaaagaaggttcaggccaag
gcagaagccaagggcgctgaaaccggcaagaccgtcagcgaagccgaggttcttcgcgcg
acacgcgacagcgttcgcgccatcatgatgatccgcgcgtaccgcatgcgcggccacctg
cacgccaagctcgatccgctcggtatcgccagcgccgtcgaggattatgacgagttgtcg
ccgaagtcctatggctttgaggaaagcgattacgaccgcaagattttcatcgataacgtg
ctcggcctcgaatacgcgaccgtacgcgaaatgatcgaaattctcgagcgcacctattgc
tcgacgctcggtgtcgagttcatgcatatgtcgagcccggaagaaaagggctggattcag
gagcgcatcgaagggcaggacaagggcgttgctttcaccgccgaaggcaagaaggcgatc
ctgtccaagctgatcgaaggcgaaggctacgagcagttcctggacgttcgtttcaagggc
accaagcgcttcggtctggatggcagcgaatcgctcattcctgcgctcgaacagatcatc
aagcgcggtggtcaggagggcctcgaagaagttgttctgggcatggcccaccgtggtcgc
ctcaatgttctcaccaacgtcatgggcaagccgcaccgcgctgtgttccacgagttcaag
ggcggttcgttcaagcctgacgatgtcgaaggttccggcgacgtgaagtaccatctgggt
gcatcgtccgaccgcgaattcgatggcaacaaagttcacctgtcactgacggccaacccg
tctcaccttgagatcgtcaaccctgttgtcatgggcaaggcccgcgctaagcaggaccag
cttgccaaggcatgggatggcgacaccattccgctgtcggagcgcgccaaggttctgccg
ctgcttctgcatggcgatgctgcctttgcaggtcagggtgttgttgctgaaattctgggc
ctgtctggcctgcgcggccaccgcgttgccggcaccatgcacgtcatcatcaacaaccag
atcggctttacgacgaacccgggcttttcgcgctcgtcgccttacccatccgacgttgca
aagatgatcgaagcaccgatcttccacgtcaacggggatgatccggaagctgttgtttat
gcggccaaggtcgccaccgaataccgcatgaagttccacaagcctgtcgtcatcgacatg
ttctgctaccgccgcttcggccacaatgaaggcgacgagccgtccttcacgcagccgaag
atgtacaaggtcattcgtgcccacaagaccgttgcgaacatctatgccgagcgtctgatt
gccgagggtcttctgaccgaaggcgaattcgaaaagatgaaggccgattggcgcgcgcat
ttggagcaggaattcgaggccggtcagagctacaagccgaacaaggccgactggctggac
ggtcagtggtccggtcttcgtgccgccgacaatgccgatgagcagcgtcgtggcaagacc
ggcgcaccaatgaagcagctgaaggaaatcggtcgcaaactgtcgaccatcccggaaggc
ttcaaggcacacaagaccatccagcgtttcatggaaaaccgtgcgcagatgatcgaaacc
ggcgaaggtctggattgggcgatggcggaagccatggcgtttggctcgctggtcgttgac
ggtcacaaaatccgcctgtccgggcaggattgcgaacgcggcacattctcgcagcgtcac
tcggttctctacgatcaggaaacggaagagcgctacattccgctggcaaaccttgcgccg
acgcaggcccgctacgaagtcatcaactcgatgttgtcggaagaagccgttctcggcttc
gaatatggctactcgctggctcgcccgaatgcgttgacgctttgggaagcccagttcggt
gacttcgccaatggtgcgcaggtcgtgttcgaccagttcatctcgtctggtgagcgcaag
tggcttcgcatgtccggtctcgtctgccttctgccgcatggttatgaaggtcagggcccg
gaacactcgtccgcccgtctggagcgctggttgcaaatgtgcgccgaagacaacatgcag
gtcgccaacgttacgacgccggctaattacttccacatcctgcgccgtcaggtgaagcgc
gacttccgcaagccgctgatcctgatgacgccgaagtccctgctgcgccacaagcgtgcg
acgtcttcgctgacggaactgggtggcgagtcctccttccaccgtcttctgtgggacgat
gcggaggtcatcaaggacggcccgatcaagctgcagaaggattcgaaaatccgtcgcgtc
gtgctttgcacgggtaaggtctactacgatctgcttgaagagcgcgaaaagcgtggcatt
gacgacgtttacctgctgcgtatcgaacagctctatccgttcccggccaaggcgctcatc
aacgaactgtcccgcttccgcaacgccgagatggtctggtgccaggaagagccgaagaac
atgggtgcgtggtcgttcatcgacccctatctggaatgggttctggcccatatcgatgcc
aagtaccagaaggtccgttacacgggtcgcccggcagcggcatcgcctgcaacaggtctg
atgtccaagcacctcgcgcagctcgcggcattcctggaagacgcgctgggagagtga
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