Agrobacterium rubi: G6M88_06970
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Entry
G6M88_06970 CDS
T08058
Symbol
pyc
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
arui
Agrobacterium rubi
Pathway
arui00020
Citrate cycle (TCA cycle)
arui00620
Pyruvate metabolism
arui01100
Metabolic pathways
arui01120
Microbial metabolism in diverse environments
arui01200
Carbon metabolism
arui01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G6M88_06970 (pyc)
00620 Pyruvate metabolism
G6M88_06970 (pyc)
Enzymes [BR:
arui01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
G6M88_06970 (pyc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
ATP-grasp_3
ATPgrasp_Ter
ATPgrasp_YheCD
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QTG00153
LinkDB
All DBs
Position
1:1468889..1472350
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AA seq
1153 aa
AA seq
DB search
MKISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLSLHRFKADESYQVGRGPHLAK
DMGPIESYLSIEEVIRVAKLSGADAIHPGYGLLSESPEFVEACNEAGLIFIGPTADTMRR
LGNKVAARNLAISVGVPVVPATEPLPDDMAEVERMAEEIGYPVMLKASWGGGGRGMRAIR
KKEDLAREVTEAKREAKAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSIQ
RRNQKVVERAPAPYLSEERRQELANYSLKIAGATNYVGAGTVEYLMDADTGKFYFIEVNP
RIQVEHTVTEVVTGIDIVKAQIHILEGETIGTPESGVPAQKDIRLNGHALQCRITTEDPE
HNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPQPDEAIARMH
RALREFRIRGVATNLTFLEAIISHPSFVGNTYTTRFIDSTPELFEQVKRQDRATKLLTYL
ADVTVNGHPETKGRVKPAANAPAPIVPYIDQPTPEGTKQLLDTLGPKGFAEWMRNEKRVL
VTDTTMRDGHQSLLATRVRTHDIARISSVYAKALPQLLSLECWGGATFDVSMRFLTEDPW
ERLALVREGAPNLLLQMLLRGANGVGYKNYPDNVVKYFVRQAAKGGVDLFRVFDCLNWVE
NMRVSMDAIAEENKLCEATICYTGDLLNSARPKYDLKYYTNLAAELEKAGAHIIAVKDMA
GLLKPAAARILFKALREATSLPIHFHTHDTSGISAATVLAAVEAGVDAVDAAMDALSGNT
SQPCLGSIVEALKGTDRDTGLDTEWIRRISFYWEAVRGQYAAFESDLKGPASEVYLHEMP
GGQFTNLKEQARSLGLESRWHEVAQTYADVNQMFGDIVKVTPSSKVVGDMALMMVSQDLT
VADVENPEKEVSFPDSVVSMLKGDLGQSPGGWPQAIQKKALKGDEPYTVRPGSLLEDADL
DAERKEIETKLERPVDDFEFASYLMYPKVFTDFALASETYGPVSVLPTPAYFYGMQDGEE
LFADIERGKTLVIVNQASSGIDDKGMVTVFFEINGQPRRIKVPDRAHGASGSAVRRKSEP
GNAAHVGAPMPGVISRVFVNQGQDVKAGDVLVSIEAMKMETALHAERDGKVAEVLVKPGD
QIDAKDLLIAYGE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatatcgaaaatccttgtcgccaatcgttcggagattgcgatccgtgtgttccgt
gccgccaacgagcttggcataaaaacggtcgcgatctgggctgaagaggacaaactttcg
ctgcatcgcttcaaggcggatgaaagttatcaagtgggtcgcggcccgcatctggcaaaa
gacatgggaccgatcgaaagctatctttcgatcgaggaagtcattcgtgttgccaaactg
tcaggcgccgacgccatccaccccggttacggccttctgtcggaaagccctgagtttgtg
gaggcctgcaacgaggcgggtctgatcttcatcgggccgaccgccgatacgatgcgccgg
ctcggcaacaaggtggctgcacgcaatctcgccatttccgttggcgtgcccgtcgttccg
gcgaccgagcctttgcccgacgacatggccgaggtcgagcgcatggccgaggaaatcggc
tatcccgtcatgctcaaggcctcctggggcggtggtggccgcggcatgcgcgctatccgc
aagaaggaggaccttgcccgcgaggtaacggaggccaagcgcgaggccaaggctgctttc
ggcaaggacgaagtctatctcgaaaagctggtcgagcgggctcgccatgtggaaagccag
attctgggcgatacgcacggcaatgtcgtgcatctgttcgagcgcgattgctccatccag
cgccgtaaccagaaggtggtggaacgtgcgcctgctccttacctgtcggaagagcgccgt
caggaactggccaattactcgctgaagatcgctggtgccaccaactacgtcggtgctggc
acggtcgagtatctgatggatgccgataccggaaaattctatttcatcgaggtcaatccg
cgcattcaggtggagcacacggtcaccgaagtcgtcaccggcatcgatatcgtcaaggcg
cagatccacatcctcgaaggcgagactatcggtacgccggaatccggcgtccccgcgcaa
aaagacattcgcctcaacggccacgcacttcagtgccgcattacgacggaagacccggaa
cacaatttcattcccgattatggccgtatcaccgcctaccgctcggcgtccggcttcggc
attcgtctggatggcggcacgtcctattcgggtgcgatcatcacccgctattacgatccg
ctgctggtcaaggtcacggcctgggcaccgcagccggacgaggccattgcccgcatgcac
cgtgcgttgcgcgaattccgtattcgtggcgtcgcaacgaacctgacctttctcgaagcc
atcatcagccatccgagctttgtcggaaacacctacacgacgcgtttcatcgattcgaca
cccgagctgttcgagcaggtcaagcgtcaggaccgcgcgaccaagcttctgacctatctg
gccgatgtgaccgtgaacggccatcccgaaaccaagggtcgcgtcaagcctgccgccaat
gcgccagcacccatcgtgccctatatcgaccagccgacgccagagggaaccaagcagctt
ctcgacacgctgggtccgaagggctttgccgagtggatgcgcaatgagaagcgcgtgctg
gtcaccgacaccaccatgcgcgacgggcaccagtcactgctggcaacccgcgtccgcacg
catgatatcgcccgcatctccagcgtttacgccaaggccttgccgcagcttttgtcacta
gaatgctggggtggtgcgacctttgacgtctccatgcgcttcctgaccgaagacccgtgg
gagcgtctggcgctggtgcgtgaaggcgcgccgaacctgctgctgcaaatgctgctgcgc
ggcgccaacggtgttggctacaagaactacccagacaatgtcgtcaaatatttcgtccgt
caggcggccaagggcggcgtcgatttgttccgcgtgttcgactgcctgaactgggtggag
aatatgcgcgtgtcgatggatgcgatcgcggaagagaacaagctctgcgaagcgaccatc
tgctacaccggcgatcttttgaattcggcccgcccgaaatacgacctcaaatattacacc
aacctcgctgccgaactcgaaaaggcgggcgcacatatcatcgccgtcaaggacatggcc
ggtctgttgaagccagccgccgcacgtatcctgttcaaggcgctgcgtgaagcgaccagc
ctgccgatccacttccatacccatgatacgtccggtatttccgcagccacggttctggcc
gcagttgaggcgggtgtagatgccgtggatgcggcgatggatgcgctctcgggcaacaca
tcgcagccttgcctcggctcgatcgtcgaagcgctaaagggtaccgatcgcgataccggc
ctcgatacggaatggatccgccgcatttccttctattgggaagcggtgcgcggccaatat
gcggccttcgagagcgatctcaagggtccggcctcggaagtctatctccacgaaatgccg
ggtggccagttcaccaacctcaaggagcaggcccgttcgctgggtctcgaaagccgctgg
cacgaggtggcgcagacctatgccgacgtcaaccagatgttcggcgatatcgtcaaggtg
acaccgtcctccaaggtggtgggcgacatggcgctgatgatggtgtcccaggatttgacg
gttgccgatgtggaaaacccggagaaggaagtctccttccccgattcggtcgtctccatg
ctgaagggtgatctcggccagtcgccgggcggttggccgcaggctatccagaaaaaggcg
ctgaagggcgatgagccctacacggttcgtcccggttcgcttctggaagatgccgatctg
gatgccgagcgcaaggagatcgaaacgaagctggagcgcccggtcgatgacttcgagttc
gcctcctacctgatgtatccgaaggtcttcaccgactttgcgctggcgtctgaaacctac
ggcccggtctccgttctgccgacgcccgcctatttctatggcatgcaggatggcgaagaa
ctgtttgccgatatcgagcgcggcaagacgctcgtcatcgtcaatcaggcctcatccggt
atcgatgacaagggcatggtcacggtgttcttcgagatcaacggccagccgcgccgcatc
aaggtaccggatcgtgcccatggcgcatccggctctgccgtgcgccgcaagtccgaaccc
ggcaatgccgcccatgtcggcgcgccgatgcccggcgtcatctcgcgcgtcttcgtcaat
cagggacaggatgtaaaggcaggcgatgtgctggtttccatcgaagcgatgaagatggaa
acagcacttcacgcggaacgcgacggcaaggtggccgaggttctggtcaaacccggcgat
cagatcgatgccaaggatttgctgatcgcttacggcgagtaa
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