Acipenser ruthenus (sterlet): 117402224
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Entry
117402224 CDS
T07327
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117402224 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117402224 (polr1b)
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117402224 (polr1b)
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117402224 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DUF1186
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
117402224
NCBI-ProteinID:
XP_034777237
LinkDB
All DBs
Position
5:complement(68416563..68440373)
Genome browser
AA seq
996 aa
AA seq
DB search
MVKSKLCNLYRLPPKDLIKHHEEAEEMGGYFIVNGIEKIIRMLIMPKRNYPIAMVRPKWK
GRGQGYTEYGISMRCVRDEHTAINMNLHYLDNGTVMLNFIYHRELFFIPLGFALKALADV
TDFQISQELIKGREDNSFYKSCVSEMLRMVVVEGCTTKKQVLNYLGERFRVKLSLPEWYT
NQQCADFLLEHCICIHLKSNIEKFYLLCLMTRKLFTFAKGECMEENPDSLMCQEVLTPGQ
LYLMFLKEKMETWLQSLKIALDKKMQKSNITINVESLMKLFNMGLDVTRPFEYLLATGNL
RSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTTMVRRLLPESWGFLCP
VHTPDGEPCGLMNHMTATCEIVSQSFPTTSLPALLCSLGVTPVDGMPSQPYQDCYPVVLD
GAMIGWVEKDLAPSVADSLRNFKVLQQKRIPPWTEIVLVPQTGKASIYPALLIFTTPCRM
VRPVRNLALGKEELIGTFEQLFLDVGILEEEIVPGVITHQELFPHSMLSVVASFIPYSDH
NQSPRNMYQCQMGKQTMGFPLHTYQERSDNKLYRIQTPQSPLVRPSMYDHYNMDNYPIGT
NAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTELIDLDEKIKQGDDSLVFGIKPG
DPRVLQKLDEDGLPPIGTVLQYGDPFYSYMSLNTGESFVTFYKSKENCVVDNIKVCSNDS
GMGKFKRICITTRIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHG
FPSRMTIGMLIESMAGKSAAMHGLCHDATPFTFSEDHSALEHFGEMLKAAGYNFYGTERL
YSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNIQGGVRFGE
MERDALLAHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPLLEKPPPSWSTTRHRKNNCT
VCKKSDSVDVVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatccaagctgtgtaatttgtatcgccttcctcccaaggatctcattaagcac
catgaagaagcagaggagatgggaggttatttcatagtgaatggaatagaaaagattatc
cgaatgctgattatgcccaagagaaactaccctatcgcaatggtgagacctaagtggaag
ggaagaggccagggttacactgaatatggtatttcgatgcgctgtgtgagagacgagcac
acagccattaacatgaacctgcattaccttgacaatgggacagtgatgctcaacttcatt
taccacagggagctcttcttcattcctctgggctttgccttgaaggccttggctgacgtc
acagatttccagatctcccaggagttgatcaaagggagagaggacaactccttttacaag
agctgcgtgtcggagatgctgcgcatggtggtcgttgaaggatgcaccaccaagaagcag
gtcctgaactacctcggggagagattccgggtgaagctgtccctgccagagtggtacacc
aaccagcagtgtgcagacttcctgttagaacactgcatctgtatccacctgaagtctaat
atagagaagttttacctgctgtgcctgatgactcggaagctgttcaccttcgctaaggga
gaatgtatggaggaaaacccagacagcttgatgtgccaggaggtgctcacacctggacag
ctttacttaatgtttctgaaagaaaaaatggaaacctggttgcagtcgctgaaaatcgcc
ctggacaaaaagatgcagaaatcgaacattactatcaatgtggaaagtctcatgaaactg
ttcaacatgggactggatgtgaccagaccttttgaatatcttttagccacaggaaatctg
cgttcaaaaacagggctgggaatgctacaggactcgggtctctgtgtggtggctgacaag
ctgaacttcatccgctacctgtctcatttccgctgcgttcaccggggcgccgccttcgcc
aagatgaggacaacgatggtgcgcaggctgctgcctgagtcctggggattcctgtgcccg
gtccatacccccgatggggaaccctgcggcctcatgaaccacatgaccgccacctgtgag
attgtctcccagtccttccccaccacctccctccctgccctgctctgctcgcttggtgtg
accccagtggatggcatgcccagccagccctaccaagactgctatcctgtggtgctggac
ggagccatgataggctgggtggagaaggatcttgcaccctctgttgctgattctttgcgc
aattttaaggtattacagcagaagaggatccctccatggacggagattgttctcgttcca
cagacagggaaggccagcatttaccctgcactgcttatctttaccacaccctgccgaatg
gtacggcccgtccggaacctggcactgggcaaggaagagctcattggaaccttcgaacag
ctcttccttgacgttggtatattagaagaagaaatcgtgcccggggtaataactcaccag
gagctgttccctcacagcatgctcagtgtggtggcaagtttcatcccctactccgaccac
aaccagagcccaaggaacatgtaccagtgtcagatgggtaaacaaacaatgggtttccca
ctgcacacgtaccaggaacgttcagacaacaagctgtaccgcatccaaacaccacagagc
ccccttgtacggccttccatgtatgaccactataacatggacaactaccccatcgggaca
aatgccatagtcgctgttatctcatataccggctatgatatggaggatgccatgatagtg
aacaaggcttcatgggagaggggatttgctcacgggagcgtgtacaaaacggagctgata
gacctggacgagaagatcaaacagggagacgacagcctggtgttcggaatcaagcctggc
gatcccagggtgctgcaaaaactggatgaagatggactgcctcccattggaacagtgctg
cagtacggagatcccttctacagctacatgagcctcaacaccggggagagcttcgttacc
ttctacaagagcaaagaaaactgcgtcgtggacaacatcaaagtctgtagcaacgatagt
ggcatgggcaagtttaaacgcatctgcatcaccaccagaattccccggaaccccactatc
ggggacaagtttgccagccgccatgggcagaagggcatcctgagcaggctgtggcccgcg
gaggatatgcccttcacggagagcggcatggtgcctgacatccttttcaacccccacggc
ttcccttcccgcatgaccatcggcatgctgatcgagagcatggcagggaaatcagcggcc
atgcacgggctgtgccacgacgccacgccctttaccttctccgaggaccactctgctctg
gagcactttggggagatgctgaaggcggccggctacaacttctacgggacggagcgtctg
tacagtgggatcagcgggctggagctggaggctgacatctttatcggagtggtttactac
cagcggctcaggcacatggtgtctgacaagttccaggtgcggaccactggtgccagagac
aaggtcaccaaccagccggtgggcggcaggaacattcagggaggcgtccgttttggggag
atggagcgggacgccctgctggcccacgggacctccttcctgctgcatgaccggctcttt
aactgctcggaccgctcggtggcccacgtgtgtgtggagtgtggcagcctgctctccccg
ctgctggagaaacccccgccttcctggtcgaccacccggcaccggaagaacaactgcacc
gtctgcaagaaaagcgactctgtggacgtggtgtccgtgccctacgtcttccgctacttc
gttgccgagctggctgccatgaacattaaggtcaagcttgacgtcaaataa
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