Acipenser ruthenus (sterlet): 117407329
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Entry
117407329 CDS
T07327
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117407329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117407329
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117407329
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
117407329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
MTR4_beta-barrel
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
117407329
NCBI-ProteinID:
XP_034778918
LinkDB
All DBs
Position
8:2835700..2921322
Genome browser
AA seq
1483 aa
AA seq
DB search
MAPVSNPDKDIDKQDDDAGDSCGLASTRSRREKREKTGRKSALDRLKKAKAGEKVKYEVE
EISSVYEEVDEEQYSRMVRDRQDDDWIIDDDGTGYVEDGREIFDDDLAEDALDRGPKGKR
GDKGAGSKDKKNVKKVVVSKPNSIKSMFMASSVKKSSEKDIDLSKDDLLGDLLQDLHSEK
PQLLTPPPVISLKKKKPVGVPQNPFSVKLQAPKASPSPTLMKAASVPARPAGSSLRPAHP
VKSTGAPGTKRVKLEEEPQVEEAVGDMQFDEGDFDEPMEVENAEEPATTVSAAVQPVKEE
PQPEPIVKVEPKTEPTDKHSALKSSSIPESSCWELMDPEDSSVSAVEVQVDSSRLPLVMG
TEGEQVFRFYWLDAFEDPYNRPGIVYLFGKVWIESAKAHVSCCVVVKNIERTMYLLPRET
RVNLKTRAETDTPVTMMDVYQEFNEIADRYKIMKFKSKKAVKNYAFEIPDVPAQSEYLEV
RYSADLPPLPQDLKGATFSQVFGTNTTSLEHFLLGRKIKGPCWLDVKTPQLASQPVSWCK
VEAVALKSDLVSVVKDIAAPPLVVLSISMKTVQNPKTHQNEIVSLAALLHNQFPLDRAPP
QPPFETHFCVISKPNDCIYPFDFNEAVKRKNTKVEIASTERTLLGFFLAKLYKIDPDVIV
GHDIYSFDLEVLLQRINACKVPNWSKIGRLRRSVMPKLGGRSGFAEKNATCGRMICDVQI
SAKELIRCKSYHLSELVLHILKSERPVIPQEDIKNLYSDSHRLLYLLESTWMDAKFILQI
MCELNVLPLALQITNIAGNVMSRTLMGGRAERNEYLLLHAFHERDYIVPDKQVFKKVQQD
HVDDDDEGDAGQGKSRKVKKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNIC
FTTVQRLAPGSQKTAEGEEQDEIPQIPDPDQDMGILPKEIRKLVERRKQVKQLMKQPDLN
PDLHMQYDIRQKALKLTANSMYGCLGFAFSRFYAKPLAALVTHTGREILMHTKELVQKMN
LEVIYGDTDSIMINTNCANLEEVFKLGNKVKSEVNKLYKLLEIDVDGVFKSLLLLKKKKY
AALTVEPTGDGRYTTKQELKGLDIVRRDWCDLAKEGGNYVIAQILSDQPRDTIVENIQKR
LMEIGESVVNGSTPLNMFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGHKVKAGDTI
SYVICQDGSNLSASQRAYAVEQLQKQEGLSIDTHYYLSQQVHPVVSRICEPIEGIDAILI
ATWLGLDPSQFRSQQQYHRDEESEALLGAPAQLTDEEKYRDCERFKFPCPQCATENIYDS
VFDGSRKVIEPRVMRCSNTNCEAAQINYGVQMSNKLILDIRRHIKKYYSGWLMCEEQVCR
NRTRRLPLGLYRRGPVCQACMKASLRPEYPEKALYTQLCYYRYIFDWDYAVGKQEKECQS
RLNSLEEKVWYKKLKEVADKALSVSGYSEVNLSKLFQSLTCLK
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtttccaacccggataaagacattgacaagcaagacgacgatgctggagac
tcatgtggcctggcatcgactcgctccagacgagagaagagggagaagacggggcgcaag
tcagccctggaccgtctgaagaaagccaaggctggagaaaaagtgaaatacgaggtggag
gagatctccagtgtgtacgaggaggtggatgaggagcagtactcgcggatggtgcgtgac
cggcaggatgatgactggatcattgacgatgatggaactggctatgtggaagatggcagg
gagatctttgatgacgatctcgctgaggatgccctggacagaggacctaaagggaaacgg
ggtgacaaaggtgcgggcagcaaggacaagaaaaatgtgaagaaggtggtggtgtccaaa
cccaacagcatcaagtccatgttcatggccagctcggtgaagaagagctcggagaaagac
attgacttgtctaaggatgacttactgggggacctcctgcaagatctccattctgagaag
ccccagctgctgacgcccccgcctgtcatatctctgaagaagaagaagccagtgggagtg
ccccagaatccgttctctgtgaaactgcaggcccccaaggcttctccatctccaaccttg
atgaaagcggcctctgttcctgcccgcccggctggctcttctctccggccggctcaccct
gtgaagagcactggagctcccgggacgaagagagtaaagctggaggaagagcctcaggta
gaggaggctgtaggagacatgcagtttgacgagggagactttgatgagccaatggaagtg
gagaatgcagaggagcctgccaccactgtcagtgctgctgttcagccagtgaaggaagag
ccacagcctgagcccatcgtcaaagtggagcccaaaactgagccaaccgacaagcacagc
gctttgaagagctcctcgatccctgagtcctcgtgctgggagctcatggacccggaggac
agcagtgtgagtgccgtggaggtgcaggtggactccagccgcctgccgctcgtcatggga
accgagggggagcaggtcttcagattctactggctggatgcctttgaggacccttacaat
cggccaggcattgtgtatctgtttggtaaagtttggatcgagtctgcaaaggcgcacgtc
agctgctgtgtggtagtgaagaatatcgagaggacgatgtatctgttgccacgggagact
agagtaaatcttaaaaccagggcggagacagacaccccagtgaccatgatggatgtgtac
caggaattcaacgagatcgccgacagatacaagatcatgaagttcaagtcgaagaaagcg
gtgaagaactatgcttttgagatcccggatgtccccgcgcagtctgagtatttggaagtg
agatactctgctgacctgcctccgctgccccaggacttgaagggggcgaccttctcccag
gtgttcgggaccaacaccactagcctagagcacttcctgttgggcaggaagatcaagggg
ccgtgctggctggatgtgaaaactccccagctggccagccagccggtgagctggtgcaaa
gtggaggcggtggcgttgaagagtgatctggtgagcgttgtgaaggacattgcggccccg
cccctcgtggtcctgagcatcagcatgaagaccgtgcagaatccgaaaacgcatcagaac
gagatcgtgtccctggcagccttgctgcataaccagttccctctggacagagctcccccg
cagcctcccttcgagacacacttctgtgtgatcagcaagccaaacgactgcatctatccg
ttcgatttcaacgaagctgtgaaaagaaagaacaccaaggtggagattgcttcaacagag
agaacgttactggggtttttcctggcaaaactttacaagatcgaccctgatgttattgtg
ggccatgacatctacagctttgacctggaggttctgctgcaaagaatcaacgcctgcaag
gtgcctaactggtccaagatcgggcgcttgagaagatccgtcatgcccaaacttgggggc
cgcagtggctttgcagagaagaacgctacgtgtgggagaatgatctgcgacgtgcagatc
tcagccaaggagctgatccgctgcaagagctaccacctgtctgagcttgtgctgcacatt
ctcaagagcgagaggcctgtgatcccccaagaagacattaagaatctctatagcgattcc
catcgcctgctgtacctcttggagagcacctggatggatgccaagttcatcctgcaaatc
atgtgtgagctgaacgttctcccgctggccttgcagatcaccaacatcgccgggaacgtc
atgtccaggaccctgatgggtgggcgtgctgaaagaaacgagtatctcttgctgcatgcg
ttccacgagagggattacatcgtaccggacaagcaggtcttcaagaaagtgcagcaggat
cacgttgatgatgatgacgagggggatgcaggccagggcaagtccaggaaggtcaagaag
aaggcagcctacgctggaggtctcgtcctggaacccaaagttggtttctatgacaagttc
atcctgctgctggatttcaacagcttgtacccctccatcatccaggagttcaacatctgc
ttcaccacagtgcagcggcttgccccgggctcccagaaaacagctgagggggaggagcag
gatgagatcccgcagattcccgatccagaccaggacatgggaatcctgcccaaggagatc
cggaagctggtggagaggaggaagcaggtcaagcagctgatgaagcagcccgacctcaac
cctgatctccacatgcagtatgacatcaggcagaaggctctgaagctcactgctaacagc
atgtacggctgcctggggtttgccttcagcagattctatgctaaaccgctggctgccctg
gtcacacatacaggacgagagatcctgatgcacaccaaagagctggtccagaagatgaac
ctggaagtcatatacggagacaccgattccatcatgatcaatactaactgtgctaatctg
gaggaggtttttaaactggggaacaaggttaagagtgaggtgaataagctgtacaagctc
ttggagatcgacgttgatggggtcttcaagtctctgttgctgctcaagaaaaagaagtac
gcagccctgacagtagagcccacgggggatggcaggtacaccaccaagcaggagctgaag
gggcttgatatcgtcaggagagattggtgcgacctcgccaaggagggtggaaactatgtc
attgctcagatcctttcggatcagccccgagacacgatcgtggagaacatccagaagagg
ctgatggagatcggagagagcgttgtgaacggcagcactcccctcaacatgtttgaaatc
aacaaggccttgacgaaggaccctcaggattaccctgataagaagagcctgccccacgtg
cacgtggccctgtggataaactcacaggggggtcacaaggtgaaagccggggataccatt
tcatatgtcatctgtcaggacggctccaatctgagtgcgagtcagagagcctacgccgtg
gagcagctccagaagcaggagggcctgagcatcgacacgcactactacctgtcccagcag
gtccaccctgtggtgtcccgaatctgtgagcccatcgagggcatcgacgccatcctcatc
gctacgtggctgggtctggacccgtctcagttccgctctcagcagcagtatcatcgggac
gaggagagcgaggccctgctgggggcgccggcgcagctgactgacgaggaaaagtaccgc
gactgcgagaggttcaagttcccctgcccgcagtgcgccacagagaatatctacgacagc
gtcttcgacggctcgagaaaagtgattgaacccagggtgatgcgctgcagtaatacaaac
tgcgaagctgcacagataaattacggagttcagatgagcaacaaactaattctggacatc
agacgtcacataaaaaagtattacagtggctggttgatgtgtgaggagcaggtctgtcgg
aaccggacccggcgccttcctcttggcctgtatcggagagggcccgtgtgccaggcctgc
atgaaggcctccctccggcccgagtaccctgaaaaagctctctacacccagctctgctat
taccggtatatttttgactgggattatgctgtgggtaaacaagagaaagaatgccagtcg
cgactgaactcgttggaggaaaaggtgtggtacaagaagctgaaggaagtcgctgacaaa
gctctgtcggtgagcggctactccgaggtcaatctcagcaagctcttccagtcccttacc
tgtctcaagtag
DBGET
integrated database retrieval system
