Acipenser ruthenus (sterlet): 117419415
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Entry
117419415 CDS
T07327
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03020
RNA polymerase
arut04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117419415
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117419415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117419415
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117419415
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117419415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117419415
NCBI-ProteinID:
XP_033888034
LinkDB
All DBs
Position
14:14405371..14438930
Genome browser
AA seq
1132 aa
AA seq
DB search
MDVLAEEFGDMRPEQLAAPVNTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMN
ANEKVTSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLMGKTPAEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVDVDRKGTVGASVTSSTHEKKSRTNITVKQGRFYMKHNTLSEDAPIAIIL
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKIRRQRMWGGP
KKTKMEEARELLASTVLSHVPVKEFNFRAKCIYMAVMVRRIILAQGEHKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDVVKHMRQDQITNGMVTAISS
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPNVFLVFL
NGNILGVIRDHQKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GNPAVTNKHIEELTQGYRNFEDFLHESLVEYLDVNEENDCSIALYEHMITKYTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIAYNQRNRIDTLMYLLAYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYRNAKCVLKR
YTNQTFDKVMGPMLDAATRKPIWRHGILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPQQPQFRDVPITYKGSTDSYIEKVMISSNAEEAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLVRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctcgcagaggaattcggggacatgcgccccgagcagcttgcagctccagta
aatacagttgaggagaaatggaagttgttaccagccttcctgaaggtgaaaggacttgtg
aaacagcacattgactccttcaactattttattaacgtggagataaagaaaatcatgaat
gctaatgaaaaggttacaagtgatgcagatccaatgtggtatttaaagtacctcaatatt
tatgtgggaatgcccgatgtagaggaaagcttcaatgtaacaagaccagtatctccacat
gagtgtcgtctgagagacatgacctactctgccccaattacagtggatattgagtatacc
cgaggaagtcagagaatcattcgcaatgccttacccattggcagaatgccaatcatgcta
cgtagctccaactgtgttctcatggggaaaactccagcagagttttctaagctgaatgaa
tgccctcttgatccaggggggtactttattgtgaaggggcaggaaaaggtcattttaatt
caggagcagctgtccaaaaaccgaattattgttgacgttgacaggaaaggaacggtgggg
gcctctgtgaccagctccacccatgagaagaaaagcagaaccaatataaccgtaaagcaa
ggaaggttctacatgaaacacaacaccctgtccgaggacgcccctattgcaatcatcttg
aaggccatgggggtggagagtgaccaggagattgtccagatgattgggactgaggagcac
gtgatggcagccttcgcccccagcctggaggagtgtcagaaagcccagatcttcacacag
acacaggctttaaagtatattggaaacaagattcgaaggcagcgcatgtggggcggacca
aagaaaacaaaaatggaagaggcacgagagcttctggcttcaaccgttcttagccatgta
cctgtgaaagaatttaacttccgtgcaaaatgtatttacatggcagtgatggtccgcagg
atcattttggctcaaggcgaacacaaggtggatgacagggactattatggaaacaaacgt
ctggaattagcaggacaattgctctccctgttgtttgaagatctgtttaaaaagttcaac
tctgaactaaagaagatttcagaccagattattcccaagcagagagcagctcagtttgat
gtagtgaagcacatgcgacaggatcagatcaccaacggcatggtcacagcaatctcttct
ggaaactggtcattaaagagattcaagatggatcgtcagggagtgacccaggtgctgtct
cggctgtcttatatctcagcactaggcatgatgactagaatctcatcccagtttgaaaag
accaggaaagtgagtggccctcgctccctgcagccatcgcagtggggaatgctgtgtccg
tctgacactcctgaaggagaggcttgcggtctagtaaaaaaccttgctttgatgacccat
atcactactgacatggaagatgggcctattattaaattagcttttaacctcggggtggaa
gatgtgaatctactgtgtggtgaagagttgtcctatcccaacgtgttccttgtctttctg
aatggcaacattcttggggtaatccgggatcaccagaagcttgtgtccaccttccgactg
atgaggcgagctggcttcattaacgagtttgtgtctatctcaacaaacctcactgatcgc
tgtgtttacatctcctctgatggagggagactgtgcaggccttacatcattgtaaagaaa
ggaaaccctgcagttacaaacaaacacattgaagaactcacgcaggggtacaggaatttt
gaagattttcttcatgaaagcttggttgaatatctagatgtcaacgaagagaatgattgc
agcatagcactgtatgaacacatgattaccaaatatacgactcacttggagatcgagcca
ttcacactgctaggtgtttgtgctgggctcattccataccctcatcacaaccagtcccca
agaaacacataccagtgtgctatggggaaacaagctatgggcacaatcgcctacaaccag
agaaaccgaattgacaccctcatgtacctgttggcctatccacagaaacccatggttaag
acaagaaccattgaactcattgattttgaaaagcttccagcaggacagaatgctactgtg
gcagtgatgagctacagcggctatgatattgaagatgcacttgttctaaataaggcctct
ttggatagaggttttggaagatgccttgtgtacaggaatgccaagtgtgttcttaaacgg
tacaccaaccagacctttgataaggtaatgggcccaatgctggatgcagctacgcgaaaa
ccaatctggcgtcatgggatccttgatgcagatggaatctgctctccaggtgagaaggtg
gagaataagcaggtcctggttaataagtctatgcccactgttacccagacccctctggag
ggcagtgcccagccacagcagccacagttcagagatgtgcccatcacatacaagggatca
acagactcttatattgaaaaggtgatgatttcctcaaatgcagaagaagccttcttgatt
aaaatcttgctaaggcaaaccagacggccagaaattggtgataaattcagcagtcgtcac
ggccagaaaggggtatgtggtttgattgtccctcaagaagatatgccattctgcgacact
ggaatctgccctgatatcattatgaatcctcatggttttccatcccgcatgacggttggg
aaactgattgaattgctggctggcaaggctggtgttttggatggcagatttcattatgga
acagcctttggtggcagtaaagttaaggatgtttgtgaggatcttgttcgctatggctac
aactatttgggaaaagactatgtgacatctggtatcacgggagaaccattggaagcatac
atttactttggccccgtttactaccaaaagctgaaacacatggtgctggacaagatgcat
gccagagctcggggacccagagcagtcctcaccaggcaacccacggagggcagatcgcga
gacggtggtttgcgtttgggtgaaatggagagggactgtctcattggttatggagccagc
atgctgctgctggagaggctgatgatttccagtgacgcgtttgaggtggacgtgtgcgga
cagtgtggtttactgggatattcagggtggtgtcattactgcaagtcttcctgtcacgta
tcttcactgcgcatcccttatgcatgtaaactgctgttccaggaacttcagtctatgaac
attgtgcccagattgaaactgtccagatacaacgaatga
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