Acipenser ruthenus (sterlet): 117421210
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Entry
117421210 CDS
T07327
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04210
Apoptosis
arut04218
Cellular senescence
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut04623
Cytosolic DNA-sensing pathway
arut04625
C-type lectin receptor signaling pathway
arut04920
Adipocytokine signaling pathway
arut05132
Salmonella infection
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117421210
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117421210
04218 Cellular senescence
117421210
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117421210
04621 NOD-like receptor signaling pathway
117421210
04622 RIG-I-like receptor signaling pathway
117421210
04623 Cytosolic DNA-sensing pathway
117421210
04625 C-type lectin receptor signaling pathway
117421210
09152 Endocrine system
04920 Adipocytokine signaling pathway
117421210
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117421210
09171 Infectious disease: bacterial
05132 Salmonella infection
117421210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117421210
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117421210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
117421210
NCBI-ProteinID:
XP_033891204
LinkDB
All DBs
Position
1:46940460..46989393
Genome browser
AA seq
1008 aa
AA seq
DB search
MADEDSYLGGQGHHMFEIDPFSSLMGMEPFTFPNMATTNSLRIADGPYLQIIEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSFPQVKICNYQGPAKIVIQLVTHSKEVHLHAHSLVG
KQCDKGICVADLQPKDTSISFPNLGILHVTKKNVTKTLEDRMTEAYRLGYNFGVSIHPEI
NSLQTEGRVPRELTDHQRCLIANAAISQAKDMDLSVVQLMFTAFLPDSDGGYTRRLDPVI
SDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDETGGYWE
TFGDFSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQVID
KEEVQRKRQKTLPSFPDYGAGSGGGGGGMYGGAGGAPGTGGAGFNYQGYSNYNHFGSRYP
YSGGPSSSGAGMKHASKGHADDGDDSDLDDDSEAQSNLRTNCQEKSEDVQKACEEESTSD
GVNQGPTEDSLKMEEAKSRVDRLFTEKAMQLAKRHTDALFNYTVTGDVRMLLAVQRPLMA
VQDENGDTKGAWFHKRIGSARSTGRCRFSHALHLGVLHHRSETAKNLVEVISSIPGEDVI
NMRNDLYQTPLHLAVITQQADTVEALLKANADLSLADRHGNTALHLAAKQGESKILSLLL
QRQEAAGLIKHPNSEGLSALHLAVLANSLLSLRQLISYGVDVEECEQSSGRTALHLAVEQ
ENICLAGSLLLEGSAYVDSSTYDGSTPLHIAAGRGSVKMTALLMAAGADAHKENCEPLYD
TDDRGYEEEEEEDEEFVPGTTPLDMALSDEVFDLLNGKQYEPKLKSSSLPPQGDMNDLSE
EDKQELYKVLELPGQSWEVLAQWLGLGVLNSAFKLSPSPAKTLLENYEVSGGTIMELLDG
LKSIGNSEAVDIVQKALFGAVYKKNEDTPVPGSPALAKQQTGVQLPNGLQDLKNYSSEDN
SAYDSGVETSFRRFSLYSSESLNCTPEELGPSGISKVPKQGFVVEGEL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagattcttatctggggggacaaggtcaccatatgtttgaaatagacccg
ttttcatctttaatgggaatggagccttttacttttcctaacatggcgaccaccaattca
ctgcgaatagcagatggaccatacctccaaattatagaacaacctaaacagagaggcttt
cgtttccgctacgggtgtgagggaccatcgcacggtggcttgcctggagcctcaagtgag
aagaacaggaaatccttcccacaagtcaagatatgcaactatcagggaccagcaaagatc
gtcattcagctcgtgacccattccaaagaggtgcacctgcatgcacacagcctggttgga
aagcagtgtgacaaaggcatatgtgtggctgacctgcaacccaaagatacaagcatcagt
tttccaaacctgggtattcttcatgtcactaaaaagaacgttaccaagaccttggaggac
agaatgactgaggcgtacagattgggctacaacttcggcgtctcgattcacccagaaata
aattctttacaaaccgaggggcgagtaccaagagaactcacagatcaccagagatgcctc
atcgctaatgctgccatcagtcaggccaaggacatggatctcagtgtggttcagctgatg
ttcacagcattcctacctgacagtgatggtggatacacgaggcgactggaccccgtcatt
tcagatccaatttttgacagcaaagccccaaatgcctctaatttaaagattgtgaggatg
gaccgcacagctggctgtgttactgggggtgaagaggtctatttgctttgtgataaggtt
caaaaagatgacatccaagttcggttctatgaggaggatgaaacaggaggatactgggaa
acgtttggagatttttctccaacagacgtgcacagacagtttgctatagtctttaagact
ccaaaataccgggacctcaacttgcaaaaaccaacctctgtgtttgtccagctgaaaaga
aagtctgacaatgagacaagtgaaccaaagcccttcacttaccatccacaggttatagat
aaagaggaggtccagaggaagcgtcagaagacactgcccagctttccggattatggtgct
ggatctggtggagggggaggagggatgtacggtggggcaggaggggctcctggaacagga
ggggctggatttaattaccaaggatactcaaactataatcattttggaagccgctatcca
tattctggtggtcccagcagctctggtgctggaatgaaacatgcttcaaagggccatgca
gatgatggcgatgacagtgacttggatgacgatagtgaggcccagagtaatctgaggact
aactgccaggagaagtccgaagacgtgcagaaagcctgtgaggaggagagtacatcagat
ggagtgaatcagggccctaccgaagattcacttaagatggaagaagccaaaagcagagtc
gaccgactattcactgaaaaggctatgcagcttgctaagcgacatacagacgcgctcttt
aattacaccgtcactggggatgtgaggatgttactggctgttcagagacccctcatggca
gttcaggatgaaaacggagatacaaaaggggcctggttccacaaaaggattggctctgcg
agatcaacagggcggtgcagattttcacatgccttgcaccttggtgttctccaccacaga
tctgagactgctaaaaatcttgttgaagtgatttctagtattcctggggaggatgtgatc
aacatgaggaacgacctctaccagactcctttacacttggccgttattacacagcaagca
gacacagtggaagctttgttaaaagctaatgcagatttaagtctcgcagatcgccatggc
aacacagctttacacctggctgccaagcaaggagagtcaaagattctgagccttctactc
caacgccaggaagcagctggactgattaaacatcctaacagtgaaggtttgagtgctctt
catttggcggtgctggccaatagcttgctgtctcttagacagcttatctcttatggcgtg
gatgttgaagaatgcgagcagagttccggtcgaactgcactacacctggcagtagagcag
gagaacatctgtttagctggaagccttctccttgagggcagtgcttatgtggattcctct
acatacgatgggtctactccactccacatagcagctggaaggggctccgtcaaaatgact
gctcttcttatggcagctggagcagatgcacataaagagaactgcgagcccctatatgat
actgatgacagaggctatgaagaggaggaggaggaggatgaagagtttgttccagggacc
acccctttggacatggcactcagtgatgaggtctttgatctactgaatggaaaacagtat
gaaccaaagttaaagtcttccagtttaccaccacaaggtgatatgaatgatctcagtgaa
gaagataagcaggagctgtacaaagtcctggagctgcctggtcagagctgggaggtcctg
gcacagtggctaggattaggagtcctaaacagtgctttcaaattaagcccatcaccagcc
aaaacactgctggagaactacgaggtttctggtggtactataatggagctgctagatggt
ttaaaatcaatagggaactcagaagctgttgatattgttcagaaagctctgtttggtgct
gtgtataagaaaaacgaggacacccctgttccaggctcgcctgctcttgccaaacagcag
acaggtgtccagcttccaaatggactgcaggatctcaagaactacagcagtgaagacaat
agcgcgtacgacagtggggtagaaacgtcttttaggaggtttagcctctattcttccgaa
tcgctgaattgtactccagaagaattgggaccgtctggaatatccaaggtccctaagcaa
ggctttgttgttgagggagaattataa
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