Acipenser ruthenus (sterlet): 117430368
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Entry
117430368 CDS
T07327
Name
(RefSeq) sodium-dependent serotonin transporter-like isoform X2
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117430368
Transporters [BR:
arut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117430368
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
117430368
NCBI-ProteinID:
XP_033906240
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Position
20:complement(23702739..23729547)
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AA seq
724 aa
AA seq
DB search
MDCTCNPQDESKLCVDNPAFLRSEEDESDQSQQPQPQQRRKREGHPAQHSQSRGLSGPSS
STAADGRHGNGNNSSTSSTTPIAVAMEMNEPMMRESSPLSSAPENEGLQEKGRLIRGDNG
APQGTEKEFAGEKGSVSNGYPSATQSPGEGGTVAMPGCPRTLVVQQTPGSHRETWSKKMD
FLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMALFGGVPLFYMELALGQYHRSGC
ISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWAMYYFLSSFNYQLPWTSCGNPWNTI
NCTNYLQSGDNVTWEPHSISPAEEFYTRRVLQVHRSGGLHDLGSVSWQLALCLLFIFTIV
YFSIWKGVKTSGKVVWVTATFPYVVLLVLLVRGATLPGAWRGVVFYLKPDWSKLLSTTVW
VDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDAIVTSSINCLTSFMSGFVIFTVLGYM
AEMRHLEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMIITLGLDSTFAGLEGV
ITAMMDEFPDLLSKRRELFVLGIISVCFLGALTTLTYGGAYVVKLFEDYATGAPVIIVVF
LEVIAVSWFYGMPRFCRDVQLMLGFSPGWYWRICWVAICPIFLLFIICSFLVFPPQLKLF
HYDYPPWSTVLGYCIGISSFICVPAYMVYLLVVTPGTLKQRLLKSITPEPGIEIPRCDII
TNAV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggactgcacctgcaacccgcaagatgagagtaagctctgtgtggacaaccccgccttc
ctaaggtctgaggaggacgaatctgaccaatcacagcagccacagccgcagcagcgcagg
aaaagggaggggcatcctgctcagcacagccaatcccgtgggctttctggtccttcttct
tccactgcagcagatgggcgccacggaaacggaaacaacagcagtactagtagcaccacg
cccatagctgtcgccatggagatgaacgagccaatgatgagagagagcagccccctgagc
tccgcccctgagaacgagggcctgcaagagaaggggcggctgattcggggggacaatggt
gccccccaggggacagagaaggagtttgcaggggagaagggaagcgtttctaacgggtac
ccatcggccacacagagccctggagaggggggcacggtggcaatgccaggctgccctcgg
actctcgtagtgcaacagacccctggcagccaccgggagacctggagcaagaagatggac
ttcctgctgtctgtgattggctacgccgtggacctggggaacgtgtggcgcttcccatac
atctgctaccagaacggagggggtgctttcctcttgccctacctgctgatggcgctgttt
ggaggggtgcccctgttctacatggagctggctctggggcagtaccatcgcagcggctgc
atctccatctggaagcacatctgccccatcttcaaaggtattggcttcgcgatctgcatc
atcgctctctacatcgccttctattacaacaccatcatggcctgggcgatgtactacttc
ctgtcctccttcaactaccagctgccctggaccagctgcgggaacccgtggaacaccatc
aactgcaccaactacctgcagagcggcgacaacgtgacctgggagcctcactccatctcc
cccgcggaggagttctatacgcgtcgggtgttgcaggtccatcgctcgggggggctgcac
gaccttggctctgtcagctggcagctggctctgtgcctgctcttcatcttcaccatcgtc
tacttcagcatctggaagggcgtcaagacctccggcaaggtggtttgggtcacagctacc
ttcccctatgtggtgctgctggtgctgctggttcgaggagcgaccctgccgggggcgtgg
aggggagtcgtcttctatctgaaacctgactggagcaaactgttgagcacgacggtgtgg
gttgatgctgcagctcagatcttcttctccctcggacccgggttcggggtcctgctcgcc
ttcgccagctacaaccccttccacaacaactgctacaaggatgccattgtgaccagctcc
atcaactgcctgaccagcttcatgtccggcttcgttatcttcaccgtgctcggatacatg
gcggagatgaggcacctggaggtgtccgaggtggccaaggacacgggacccagtctgctc
ttcatcacctacgcagaagccatcgctaacatgcccgcctccaccttcttcgcaatcatc
ttcttcctcatgatcatcacgctcggactcgacagcacattcgcagggctggagggtgtg
atcacggctatgatggatgagtttcctgacctgctgtccaagcgcagggagttgtttgtt
ctcgggatcatctctgtgtgcttcctgggggctctcaccaccctgacctacggaggtgcc
tacgtggtcaagctgtttgaggattatgccacgggcgcgcccgtcatcattgtggtcttc
cttgaggtcattgcagtctcctggttctacgggatgcctcggttctgccgcgatgtccag
ttgatgctgggtttcagtccaggctggtactggaggatctgctgggtggcaatctgcccc
atcttcctgctgttcatcatctgcagtttcctggtgtttcccccgcagctcaagctgttt
cactatgactatcccccctggtccaccgtgctggggtactgcatcgggatctcctctttc
atctgtgtgccagcctacatggtgtacctgctcgtggtcaccccgggcactttaaaacag
cgcctgctgaagagcatcactcccgagcctggcatagagatcccgcgctgtgacatcatc
accaacgcagtgtaa
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