Acipenser ruthenus (sterlet): 117962405
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Entry
117962405 CDS
T07327
Name
(RefSeq) sodium-dependent serotonin transporter-like isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117962405
Transporters [BR:
arut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117962405
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
117962405
NCBI-ProteinID:
XP_034763049
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Position
27:4833211..4859583
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AA seq
753 aa
AA seq
DB search
MQSVESVLKETGPVRQVTPTEHHMRGSAEAKQCLQNEIFPLLCVDNPAFLRSEEDESDQS
QQPQPQQRRKREGHPAQHSQSRGLSGPSSSTAADGRHGNGNNSSTSSTTPIAVAMEMNEP
MMRESSPLSSAPENEGLQEKGRLIRGDNGAPQGTEKEFAGEKGSVSNGYPSATQSPGEGG
TVAMPGCPRTLVVQQTPGSHRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFL
LPYLLMALFGGVPLFYMELALGQYHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNT
IMAWAMYYFLSSFNYQLPWTSCGNPWNTINCTNYLQSGDNVTWEPHSISPAEEFYTRRVL
QVHRSGGLHDLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYVVLLVLLV
RGATLPGAWRGVVFYLKPDWSKLLSTTVWVDAAAQIFFSLGPGFGVLLAFASYNPFHNNC
YKDAIVTSSINCLTSFMSGFVIFTVLGYMAEMRHLEVSEVAKDTGPSLLFITYAEAIANM
PASTFFAIIFFLMIITLGLDSTFAGLEGVITAMMDEFPDLLSKRRELFVLGIISVCFLGA
LTTLTYGGAYVVKLFEDYATGAPVIIVVFLEVIAVSWFYGMPRFCRDVQLMLGFSPGWYW
RICWVAICPIFLLFIICSFLVFPPQLKLFHYDYPPWSTVLGYCIGISSFICVPAYMVYLL
VVTPGTLKQRLLKSITPEPGIEIPRCDIITNAV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgtggaatctgttctgaaggaaactggtcctgtaagacaggtcaccccaaca
gaacaccacatgaggggatctgctgaggcaaagcagtgccttcaaaatgaaatctttcct
ttgctctgtgtggacaaccccgccttcctaaggtctgaggaggacgaatctgaccaatca
cagcagccacagccgcagcagcgcaggaaaagggaggggcatcctgctcagcacagccaa
tcccgtgggctttctggtccttcttcttccactgcagcagatgggcgccacggaaacgga
aacaacagcagtactagtagcaccacgcccatagctgtcgccatggagatgaacgagcca
atgatgagagagagcagccccctgagctccgcccctgagaacgagggcctgcaagagaag
ggacggctgattcggggggacaatggtgccccccaggggacagagaaggagtttgcaggg
gagaagggaagcgtttctaacgggtacccatcggccacacagagccctggagaggggggc
acggtggcaatgccaggctgccctcggactctcgtagtgcaacagacccctggcagccac
cgggagacctggagcaagaagatggacttcctgctgtctgtgattggctacgccgtggac
ctggggaacgtgtggcgcttcccatacatctgctaccagaacggagggggtgctttcctc
ctgccctacctgctgatggcgctgtttggaggggtgcccctgttctacatggagctggct
ctggggcagtaccatcgcagcggctgcatctccatctggaagcacatctgccccatcttc
aaaggtattggcttcgcgatctgcatcatcgctctctacatcgccttctattacaacacc
atcatggcctgggcgatgtactacttcctgtcctccttcaactaccagctgccctggacc
agctgcgggaacccgtggaacaccatcaactgcaccaactacctgcagagcggcgacaac
gtgacctgggagcctcactccatctcccccgcggaggagttctatacgcgtcgggtgttg
caggtccatcgctcgggggggctgcacgacctgggctctgtcagctggcagctggctctg
tgcctgctcttcatcttcaccatcgtctacttcagcatctggaagggcgtcaagacctcc
ggcaaggtggtttgggtcacagctaccttcccctatgtggtgctgctggtgctgctggtt
cgaggagcgaccctgccgggggcgtggaggggagtcgtcttctatctgaaacctgactgg
agcaaactgttgagcacgacggtgtgggttgatgctgcagctcagatcttcttctccctc
ggacccgggttcggggtcctgctcgccttcgccagctacaaccccttccacaacaactgc
tacaaggatgccattgtgaccagctccatcaactgcctgaccagcttcatgtccggcttc
gttatcttcaccgtgctcggatacatggcggagatgaggcacctggaggtgtccgaggtg
gccaaggacacgggacccagtctgctcttcatcacctacgcagaagccatcgctaacatg
cccgcctccaccttcttcgcaatcatcttcttcctcatgatcatcacgctcggactcgac
agcacatttgcagggctggagggtgtgatcacggctatgatggatgagtttcctgacctg
ctgtccaagcgcagggagttgtttgttctcgggatcatctctgtgtgcttcctgggggct
ctcaccaccctgacctacggaggtgcctacgtggtcaagctgtttgaggattatgccacg
ggcgcgcccgtcatcattgtggtcttccttgaggtcattgcagtctcctggttctacggg
atgcctcggttctgccgcgatgtccagttgatgctgggtttcagtccaggctggtactgg
aggatctgctgggtggcaatctgccccatcttcctgctgttcatcatctgcagtttcctg
gtgtttcccccgcagctcaagctgtttcactatgactatcccccctggtccaccgtgctg
gggtactgcatcgggatctcctctttcatctgtgtgccagcctacatggtgtacctgctc
gtggtcaccccgggcactttaaaacagcgcctgctgaagagcatcactcccgagcctggc
atagagatcccgcgctgtgacatcatcaccaacgcagtgtaa
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