Acipenser ruthenus (sterlet): 117964645
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Entry
117964645 CDS
T07327
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04020
Calcium signaling pathway
arut04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117964645
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117964645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117964645
Ion channels [BR:
arut04040
]
Ligand-gated channels
Glutamate (ionotropic)
117964645
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
117964645
NCBI-ProteinID:
XP_034764762
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All DBs
Position
30:18244770..18267819
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AA seq
972 aa
AA seq
DB search
MRLFLLAVFFSCSFARGGCDPKIVNIGAVLSTKKHEQMFREAVNLANKRHGSWKIQLNAT
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMRVFRWNHIILIVSDDHEGRAAQKRLETL
LEEKESKNKKRNYENLDQLSYDNKRGPKAEKVLQFEPGSKNVTSLLLEAKELEARVLILS
ASEDDAATVYKAAAVLNMSGSGYVWLVGERELSGNALRYAPDGVIGLQLINGKNESAHIS
DAVAVVAQSVHELFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGVTGRVEFND
DGDRKYANYSIMNLQNRKLVQVGVYNGSNVLLNDRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTLLDGTCPEEFTVNGDLIKKVICTGPNETIPGNKTGRPIVPQCCYGFCI
DLLIKLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQGDMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNLLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDNKEAPGREVLGRAGTP
RLTSIFLETQDDRKSGSAEPDPDPKTKATFRSISTTLASSFKRRRSSKDTQYHPTDITGQ
LNLSDPSVSTVV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttttctgcttgcagtatttttttcttgctcctttgcaaggggcggctgtgac
cccaagatcgtgaacatcggagccgtgctgagcaccaagaagcacgagcagatgttcagg
gaagcggtgaacctcgcgaacaagcggcacggcagctggaagatccagctgaacgccacc
tccgtcacccacaaacccaacgccatccagatggctctgtccgtgtgcgaggacctcatc
tccagccaggtgtatgcgatattagtgagtcaccccccagctccgaatgatcacctgacc
ccgactccagtgtcctacacagcagggttctaccgcatacctgtggtggggctgaccacg
cgcatgtctatatactctgacaagagtatccacctgtcgttcctgcgcaccgtgcctccc
tactctcaccaagcccacgtgtggttcgatatgatgcgcgtgttccgctggaaccacatc
atcctgatcgtgagcgacgaccacgagggccgtgcggcgcagaagaggctggagacgctg
ctggaggagaaggagtccaagaataaaaagaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggctgagaaagttctacagtttgaacccggatccaaa
aacgtaacgtcactgctgctggaggcgaaagaactggaggccagagtgctgatcctgtca
gcgagtgaggacgatgctgccacagtgtacaaagcagccgccgtcctgaacatgagcggc
tccgggtacgtgtggctggtgggcgagagagagctgtcagggaacgccctgcgatacgcg
cctgacggcgtgatcggactccagctcattaacgggaagaacgagtcggcgcacatcagt
gacgccgtggccgtggtggcacagtccgtgcacgagctctttgagaaagagaacatcaca
gaccccccgcggggctgcgtggggaacaccaacatctggaagacaggccctctgttcaag
agagtcctgatgtcctccaagtaccccgaaggggtgacgggacgcgtggagtttaatgac
gacggcgacaggaaatacgccaactacagcataatgaacttgcagaaccgcaagctggtg
caagtgggcgtgtacaacggcagcaacgttttattaaatgacaggaagatcatctggccg
ggcggggaaactgaaaagccgcgtggatttcagatgtcgacgagattaaagatagtcacg
atacaccaggagccctttgtctatgtgaagccgaccctcctggatgggacctgcccagag
gagttcacagtaaatggagacttgattaaaaaggtgatctgcacgggccccaatgagacc
atcccaggtaacaaaacaggacgccccattgtcccgcagtgttgttacggtttctgcatc
gacctgcttatcaagctggccaagacgatgaacttcacatacgaggtgcatctggtagct
gatgggaagtttggaacgcaggaacgagtgaacaacagcaacaagaaggagtggaacggg
atgatgggagagctcctcagcggtcagggagacatgatcgtggctcctctgaccatcaac
aacgagcgcgcccagtacatagagttctccaagcccttcaagtaccagggcctcaccatc
ctggttaaaaaggaaatcccgcgcagcaccctggactcattcatgcagccgttccagagc
acgctgtggctgctggtggggctgtcggtgcacgtggtggccgtgatgctgtatctgctg
gaccggttcagcccgtttggacggttcaaagtgaacagtgaggaagaggaggaggatgcc
ctgaccctgtcctcagctatgtggttctcctggggggtgctgctgaactctgggatagga
gaaggggctccccggagtttttcggcgcggatactggggatggtgtgggccggcttcgct
atgatcatcgtcgcctcctacactgccaacctggctgccttcctggtgctggacagacca
gaggagcgcatcaccgggatcaacgacccccggctgcgaaatccatcggacaagttcatc
tacgcgacagtgaagcagagttcagtggacatctacttccgtcggcaggtggagctcagc
acgatgtaccggcacatggagaagcacaactacgagagcgcagccgaggcaatccaggcc
gtccgagacaacctgctgcatgccttcatctgggactctgcggtcctggagtttgaggcg
tcccagaagtgcgacttggtcaccacaggagagctcttcttccgctcaggcttcgggatt
gggatgaggaaggacagcccctggaaacagaacgtctccctcgccatcctcagttcccat
gaaaacggcttcatggaagacctggataaaacctgggtgcgataccaggagtgcgattcc
cgaagcaatgcccctgcgaccctcaccttcgagaacatggcaggtgtgttcatgctggtt
gctggaggtatcgtggccggaatatttttgatatttattgaaattgcgtacaagcgacac
aaagacgcacggagaaagcagatgcagctcgcgttcgctgccgtcaacgtctggaggaag
aacctgcaggacaataaggaggctccaggcagggaagtacttggccgagccgggactcca
agattaacgtctatctttctagagacacaggatgatagaaaaagcggtagcgcagagccc
gaccccgaccccaaaacgaaagccacttttaggtccatcagtaccaccctggcctccagc
ttcaagagacgtaggtcctccaaagacacgcagtaccacccaacggacatcacaggccag
ctgaacctctccgacccgtcagtcagcactgtggtgtga
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