KEGG   Acipenser ruthenus (sterlet): 117973384
Entry
117973384         CDS       T07327                                 
Name
(RefSeq) cyclin-dependent kinase 7-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03022  Basal transcription factors
arut03420  Nucleotide excision repair
arut04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117973384
  09124 Replication and repair
   03420 Nucleotide excision repair
    117973384
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117973384
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:arut01001]
    117973384
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arut03021]
    117973384
   03019 Messenger RNA biogenesis [BR:arut03019]
    117973384
   03400 DNA repair and recombination proteins [BR:arut03400]
    117973384
Enzymes [BR:arut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     117973384
    2.7.11.23  [RNA-polymerase]-subunit kinase
     117973384
Protein kinases [BR:arut01001]
 Serine/threonine kinases: CMGC group
  CDK family
   117973384
Transcription machinery [BR:arut03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117973384
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     117973384
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117973384
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Seadorna_VP7 Kinase-like Haspin_kinase RIO1 APH
Other DBs
NCBI-GeneID: 117973384
NCBI-ProteinID: XP_034781492
LinkDB
Position
1:113330846..113341013
AA seq 346 aa
MMAGPVKSREKRYEKLDFLGEGQFATVYKARERNTDKIVAIKKIKLGHRLEAKDGINRTA
LREIKLLQELSHQNIIGLLDAFGHKSNISLVFDFMETDLEVRIKDTSLVLTPANIKAYTL
MTLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYR
APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFEALGTPTEEQWPD
MTSLPDYVSFKMFPGTPLEHIFSAAGDDLLELLQGLFTYNPCTRLTASQALKKKYFSNRP
GPTPGPQLPRPNCSVEALKEQQNTSIGIKRKWDGTEPATLVKKLLF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgatggcggggccggtgaagtctcgagaaaaacgatacgaaaagcttgattttcttgga
gagggtcagtttgccactgtgtacaaagcaagggaaagaaatacagacaaaattgttgct
attaagaagattaagcttggacataggttggaagctaaagatggaattaacagaacggct
cttagagaaatcaagctgctgcaagagttaagccatcagaacattattggacttctggat
gcttttggacacaaatctaatattagccttgtgtttgacttcatggaaactgatcttgag
gtaagaataaaggacactagtctggttttgaccccagcaaatatcaaggcatacactctt
atgacacttcagggtcttgaatacatgcaccatcactgggtcttacacagggatttaaag
cccaataacctgttgctagatgagaatggagtactgaaacttgcagattttggtctggca
aaagcttttggaagccctaatagagtgtacacacatcaagttgtcacaaggtggtacagg
gcaccggagctgctgtttggagccaggatgtatggtgtgggtgtagacatgtgggcagtt
ggctgtatattagcagagttgctcctcagggtgccctttttgcccggagactctgatctt
gatcagctaacaaaaatatttgaagctttgggaactccaactgaagaacagtggcctgac
atgacgagcctgcctgactatgtatcattcaaaatgtttcctggaacaccactggagcat
atatttagtgccgctggtgatgatctgctggagcttctacagggcctgtttacatataac
ccctgcacacgcctcacagcctcacaggccttaaaaaagaaatatttcagtaacagaccg
ggacccacaccaggaccgcagctaccgaggcccaactgctcagtggaagctttaaaggag
cagcagaacaccagtatagggatcaagaggaaatgggatgggacagaaccagcaacactg
gtaaagaaattgctgttctga

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