Acipenser ruthenus (sterlet): 117973745
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Entry
117973745 CDS
T07327
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117973745 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arut04054
]
117973745 (ciita)
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117973745 (ciita)
Protein kinases [BR:
arut01001
]
Serine/threonine kinases: Other
TAF1 family
117973745 (ciita)
Pattern recognition receptors [BR:
arut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117973745 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
NB-ARC
NOD2_WH
RsgA_GTPase
ABC_tran
AAA_16
VapE-like_dom
AAA_22
CARD
DUF87
Motif
Other DBs
NCBI-GeneID:
117973745
NCBI-ProteinID:
XP_034782830
LinkDB
All DBs
Position
15:complement(369826..390577)
Genome browser
AA seq
1244 aa
AA seq
DB search
MVHFEEVLSRVRSSLCSASPRGVQGLLSHLLEAGVLSRDYYLCLLKEKDAEDLARRISLP
VWEKWDCCHSTIHCALDKAQSCKTKSQAAPTNPRAQDAGMDPSVLGEHSFLSLLHSDTLL
GDIPLGFPEGPFPCDAEGNQLSLDSPNIFDYLLSDLMVPNERILSPTPFEYNENIEKILK
FLEEDQQENLGEEMEMTLSDLETTCQDPARNTQYPKRDLNPADANSVDTRKPKHQKRDPR
ANRALEKKKRGWRKSCRPDQRKAQRASSPAHPVHGFVTFTLPISSLAAAGNTTLIAGGSL
APTPAPTAFQVIQNFTVPQQVFGIPVANAVHPGGPTFVIVPAAPVSSPGAAGTPSSPVAG
TVVDAAVARHPDSPSSPASPSAVSVNRSLSPASLPSTQPITTDAVTSPCKGSQSPLRSLK
TPEKPKSVEEFKESIRSYLLDTCQFVGTEDEVSLESLHIDVPLIQRQVKIKTGKNANKCL
EKELIICDAAERRRAEIPRSQIFHPNGEGSKDSKVMALLGKAGLGKSTLVQKLCQDWSRG
DFQQFELVFWFACKRLNLSGKRFGLRNLLFSLFAVPPPENTDEVFRYLLRNPEKVLIIFD
GFDDFQDCEGLLHCPATSSSKEIYSIKDLFSGLFQKKLLIGSTVLVTARPKEMFNQFLGK
VDKIVELSGFTPEDIELYMSRYFKGTSYCDGAWRKVQNNGFLFSLCSTPLICRLVCFLLE
HFDMSKDLPSTLTGLYCHVFYQKMHVNAYAAGPVNRQQKQNVPDLGALAWEGVQDHKCLL
NPRDLSSEELKEFGLSSGILSPHPASKGREEGGFGLGFAHLITQNFLGALHLILAKNISG
KSLMKQVLLEKKKKKPEEDWLDVLRRFLVGLLFQPAECSYLDCLSAEAVVSKKDALSEYL
KKIKPSDLNPSRLLELCHCVYETGNMGLVKHMVSKLPSELSFRGTPLSPPDVFVLQHLLN
KTRRAFTLDLHETGIDLCGIKQLVGQKSVTSFRASISDTISLWEHLHQTGEQGLLKDSIS
KFTINPFKASRISDVEHLCLLVQIYRERKLPSCDTETGPGDEIFEIPAVKELRKLEFALG
PVYGSVGFLKLVEVLPAFERLQHLDLEALTDNKIGDRGVERLTGAFPALSSLETLNLSQN
YIGDRGAERLAQCLPSLVSLKHLSLYSNLIGDCGAENMAKALPEMKSLTELDVKYNKITD
VGAQKLTESLKSCLWIKSLAMWNQSIPHGVLEHMKQQDSRINLL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggttcactttgaagaggtgctctcccgcgtgaggagctcgctgtgcagtgcctccccc
cgcggggtccagggcttgctgtcacacctgctggaggctggtgtcctgtcccgggattac
tacctgtgcctgctcaaggagaaggatgcagaggacctggccaggaggatctctctccca
gtgtgggagaaatgggactgctgccacagcaccatccactgtgcgctggacaaagcacag
agctgcaaaaccaagtcacaagcagctccgaccaacccccgagcccaggatgcaggcatg
gacccctcagtcctgggagagcacagcttcctgagcctgctgcacagcgacacactgctg
ggggacattccactcggcttccctgagggaccctttccctgcgatgcggaaggtaaccag
ctctctctggattctcccaacattttcgactacctgctgtcagacctgatggtgcccaac
gagagaatcctctctccgaccccttttgagtacaacgaaaacatcgaaaaaatattgaag
tttttagaggaagaccagcaagagaatttgggggaagaaatggagatgacactttcagac
ctggaaaccacgtgccaggaccctgcgagaaacacccaatatcccaagagagacctgaac
ccagccgatgccaactctgtggatacaaggaaaccgaagcaccagaaaagagatccccga
gcaaaccgagcgcttgagaaaaagaagcgaggctggaggaagagctgccgacccgaccag
agaaaagcacagagagcgagttctcccgcacaccctgtccacgggtttgtcactttcaca
cttcccatctccagcctcgctgctgctggaaacactacactcattgctggaggctctttg
gcccctacccctgcacccacagccttccaggtcattcagaacttcacagtccctcagcag
gtcttcggtatccctgtcgccaatgctgtgcaccctgggggcccgacgtttgtgattgtg
cctgctgctccagtgtcctctcccggggctgcaggaactcccagctcacccgtcgcaggt
actgtcgtcgatgctgctgtcgccaggcaccctgacagcccctcctctcccgctagcccc
tctgctgtgtctgtgaacagatccctttctccagcctctctccccagcacccagcccatc
actaccgatgcagtgacatccccctgcaaaggatcgcagtctccactgcggtccctgaag
acccctgagaaacccaagtctgttgaagagtttaaagagtccataagaagttacctgctc
gacacctgccagttcgtgggcacggaggacgaagtgtccctggagtctcttcacattgac
gtgcctttgatccagaggcaggtcaagatcaaaacggggaagaacgccaacaagtgtctg
gagaaagagctgatcatctgcgacgcagcagagaggaggagagccgaaatcccccggagc
cagatattccatcccaacggggaggggtcgaaagactccaaagtgatggctttgctggga
aaggccgggctgggtaaaagcacgctcgtccagaagctttgccaggactggtccaggggg
gacttccagcagtttgagttggttttctggttcgcgtgcaagaggctgaatctgtctggg
aagcgctttgggttgaggaacctgctcttcagtctctttgcggtgccgcccccggagaac
accgatgaggtcttcagatacctccttcgcaaccccgagaaggtcctgatcatattcgat
ggctttgatgacttccaggattgcgaaggcctccttcattgccctgccaccagctcctcc
aaggagatctacagcatcaaggacctgttttcgggtctctttcagaagaaactgctcatc
ggaagcacggtactggtcactgccagacccaaagaaatgttcaaccagttcttgggaaag
gtggacaagatagttgagctcagtggcttcacccccgaagacattgagctgtacatgagc
aggtacttcaagggcacttcatactgcgacggcgcgtggaggaaggtccagaacaacggg
tttctttttagtttgtgctctaccccgctgatatgcaggttagtgtgcttcctcctcgaa
cactttgacatgagcaaagacttgccgtccacgctcacgggactctactgccacgtgttc
taccagaagatgcacgtgaatgcgtacgcagcgggtcctgtgaacaggcagcagaagcag
aatgtccctgatctgggcgccctagcctgggaaggggttcaggaccacaagtgcctcctg
aacccaagagacttgtcatccgaggagctgaaggagttcggtctgagcagcgggatcctg
agccctcacccagcgagcaagggcagagaggagggcggcttcggccttgggttcgctcat
ttgatcacacagaatttcctgggggctctgcacctgatcttggccaaaaacatcagtggc
aaaagcctgatgaagcaggtcctcctggagaagaaaaagaagaagcctgaggaagactgg
ctggacgtgctgcgcaggttcctggtggggctgctgtttcaacccgcagagtgttcatat
ctggactgcttgtctgccgaggctgtagtgtccaagaaagacgcgctttctgaatacttg
aagaagatcaaacccagcgatctgaaccctagcaggctgcttgagctgtgccactgtgtc
tacgagacgggcaacatgggcctcgtgaagcacatggtctccaagctcccctcagagctc
tcctttaggggcacgcctctctccccacccgacgtgtttgtactgcagcacctcctgaac
aaaaccagaagagccttcaccctggacctgcacgagacaggcatcgacctctgtggaatc
aaacagctggtggggcagaagagcgtaacgtcgttcagggcttctatatcagatacaata
agcctttgggagcacctgcaccagactggggagcaaggtcttttaaaggactccatctcc
aagttcactatcaaccctttcaaagcctcgcggatcagtgatgttgagcacctctgtctg
cttgtgcagatctaccgggagaggaagcttccttcatgtgacacagaaactgggcctggc
gatgagatctttgagatcccagccgtgaaggaactccggaagctggaatttgcactcggt
cctgtttacggatctgtggggtttttaaagctggtggaggtccttcctgcgtttgagcgg
ctgcagcacctggaccttgaagcactgaccgataacaaaatcggggacaggggagtggag
cggctgacgggggctttccctgctttatcatcgctggagacgctcaacctgtcccagaac
tacattggagatcgaggagccgagagactggcacagtgtcttccttccctcgtgtcactg
aagcatctcagcttgtacagtaatctgattggggattgtggagcagagaacatggccaag
gcactcccagagatgaagtctcttaccgaactcgacgtgaaatataacaagatcacggac
gtgggggcgcagaagctgaccgagagtctcaagagctgtctgtggataaagagcttggca
atgtggaatcagtccatcccacatggagttttggagcacatgaaacaacaggattctaga
atcaacctgctttag
DBGET
integrated database retrieval system
