Achromobacter seleniivolatilans: RAS12_17950
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Entry
RAS12_17950 CDS
T09953
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asel03016
]
RAS12_17950 (mnmC)
Enzymes [BR:
asel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
RAS12_17950 (mnmC)
Transfer RNA biogenesis [BR:
asel03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RAS12_17950 (mnmC)
BRITE hierarchy
Motif
Pfam:
Methyltransf_30
DAO
3HCDH_N
NAD_binding_9
NAD_binding_8
Pyr_redox_2
Pyr_redox
FAD_binding_3
XdhC_C
TrkA_N
Couple_hipA
Lycopene_cycl
HcgC
Motif
Other DBs
NCBI-ProteinID:
WMD18521
LinkDB
All DBs
Position
complement(3985467..3987338)
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AA seq
623 aa
AA seq
DB search
MSVSYSPLTPAVAGFDADGRLYSPVYSDVYHSPAGALGQIEHVFLRGNGLPERWRGHDVF
TVCETGFGLGLNFLALWKAWLDDPQRPASLHMVSVEAHPFERDDLAALLERLAPESWAGQ
TRQLLAQWPLLLPGLHRLEFEGGAVTLTLGFGDAQVLAPRLSVRADAFFLDGFAPERNPA
MWTVPLLRDLAKLAAPGATLATWACSGALRQALQDAGFEVRRAPGYGGKWHMTVGTAREA
GSAAAPPRARAGHAVVVGAGLAGAGIAQALAMRGWRVTVVDAGRAAGAPAHAGHLAAALT
PVVARDDNARARLSRAGSQRALARWQGLSDGAAPRVCGTVQVERDAGKSAALAVTLETLA
FPAEWVRQVDRDEASALAGLPLARGGVFFAQGMLVRPNRLIDALLRTAGVTALPAKVARV
EQAGQGWRVLDEHDAELVQADTVVLANAAGAHGLLAASGLLDALPRVAQMHALAGEVTLV
PAKALAGGPRCIVGGEGYLLPDVGEGCVVGSTYVHGATVASIGAEGQRVTLDKAAGLLMS
GHFPAFDALEPGSLPGWAGWRAVLPGRLPAVGELPQAKGLWLAIGYASRGLSWSALMGDL
IGARLCGEPAPLETDLSKLISPR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtcttactcccctttgacccctgccgtggccggtttcgacgctgacggcagg
ctttatagccccgtatatagcgatgtttatcactcgccggcgggggcattgggacaaatt
gaacatgtctttctacggggtaacggcctgcccgagcggtggcgcggacatgacgtattc
acggtttgcgagacgggctttggtcttggactcaattttctggcgctttggaaggcctgg
ctggatgacccgcagcggcctgcctcgctgcatatggtgtcggtagaggcgcatccgttc
gagcgcgacgatctggcggccttgctggagcgcctggcgccggaatcgtgggcaggtcag
acgcggcaattgctagcccaatggccgctgttgctgcccggcttgcatcgcttggaattt
gaaggtggcgctgtcacgctcacgctcgggtttggcgatgcccaagtcctggcgccgcgg
ttgagcgtaagggccgatgcctttttcctggatggatttgctccagagcgcaatccggca
atgtggaccgttcccctgctgcgcgatcttgcgaaacttgcggcgccgggcgcaacgctt
gccacgtgggcatgctcaggcgcgttgcgccaagctttacaggatgcgggattcgaggtg
cgccgtgcgccgggatacggcggcaagtggcatatgacggtgggtacagccagggaggcg
ggcagcgcggcggctccgcctcgcgcccgcgccgggcatgctgtcgtggtgggcgcgggt
ctggcgggggcgggaattgcgcaggcgctggccatgcgcggttggcgcgtcacagtggtc
gacgcaggccgtgcggcgggcgcgccggcgcatgcgggccatctggctgcggcgctgacc
ccggttgtggcccgggacgacaatgcgcgggcacggttgtcgcgagcgggcagccagcgc
gcattggcccgttggcaaggtttgtcggacggggcggcgccgcgtgtgtgcggcaccgtt
caggtggagcgcgatgcgggcaaatcggccgccttggcggttacgttggaaacgttggcg
tttccggctgaatgggttcgccaggtagaccgggacgaagccagcgccttggcgggtttg
cctttggcgcgcggcggggtgttttttgctcaaggcatgctggtgcggccgaaccgtctg
attgacgctttgctgcggactgccggcgtgactgcgctgccggcaaaggttgcccgggta
gagcaggcgggtcagggctggcgggtactggatgagcatgacgccgaactggtgcaagcc
gataccgtcgtgctggccaatgcggccggcgcgcatggcttgctggccgcaagtggtctg
ctggatgccttgccgcgtgtggcgcagatgcatgcattggcgggcgaagtgacgttggtt
ccggcaaaggcgctggcgggcggcccgcgctgcattgttggcggagagggatacctgctg
ccagatgtgggcgagggctgcgtggttggcagcacctatgtgcacggcgccaccgtagcg
agcattggcgctgaagggcagcgcgtgaccctggacaaggcggccgggctgttaatgagt
ggtcacttccctgcattcgatgctctggagccgggcagcctgccaggatgggcgggctgg
cgggcggtgttgccgggccgcttgcccgctgtgggcgaattgccgcaggcgaaaggcctg
tggctggccatcggttatgcgtcgcgcgggctttcctggtccgccctgatgggggatttg
atcggcgcgcggctgtgcggcgaacccgctccgcttgaaaccgatctgtccaaacttatt
tcaccgcgatga
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