Alkalimarinus sediminis: NNL22_02790
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Entry
NNL22_02790 CDS
T08621
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asem03009
]
NNL22_02790 (rimO)
Enzymes [BR:
asem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NNL22_02790 (rimO)
Ribosome biogenesis [BR:
asem03009
]
Prokaryotic type
ribosomal protein modification factors
NNL22_02790 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
UZW76779
UniProt:
A0A9E8HLP5
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All DBs
Position
601041..602381
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AA seq
446 aa
AA seq
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MTSVEGAPSNARIGFVSLGCPKNLVDSERILTQLRIEGYDVTPSYDDADMVIVNTCGFID
SAVQESLDAIGEALAENGKVLVTGCLGAKEDDITEVHPGVLGVTGPHAYENVLDQVHQHV
PRPEHNPFEHLIPAQGVKLTPRHYAYLKISEGCNQKCTFCIIPSMRGRLDSRPVGEVLDE
AQRLVSNGVKELLVVSQDTGAYGVDTKYRMGFWQGRPVKTRFLDLCQSLGELGAWVRLHY
LYPYPHIDDAIPLMAEGKILPYLDIPLQHASPRILKMMKRPGAIDNTLARIKKWREICPD
LTIRSTFIVGFPGETEEDFQLLLDFIQEAQLDRVGCFKYSPVEGAVANDLAEPVPEEVKE
ERLAKFMALQAKISADRLQLKVGKRMQVIVDEVTEEGSVARTKGDAPDVDGLVFIDNVTD
VEPGDILDVVIEEADEHDMWAHLADS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgtagaaggggctccaagcaatgcccgtatcggattcgtcagcctcggctgt
ccaaaaaaccttgtggactctgagcggattctgactcaactccgcatagaaggttatgat
gtaaccccaagttatgatgatgctgatatggttatcgttaatacttgtgggtttattgat
agtgcggtgcaagagtctttagatgccataggtgaagcattggctgaaaatggcaaagta
ttggttactggctgtttaggtgctaaagaagatgatattaccgaagttcatccaggcgtt
ttaggtgttactgggcctcatgcttacgagaatgttttagatcaggttcatcagcatgtt
ccacgccctgagcataacccctttgaacaccttatccctgcacagggggttaagttaacg
cctcgtcattatgcgtatttaaaaatctcagaaggctgtaatcagaagtgtacgttctgc
attatcccatcaatgcgaggccgccttgatagccgaccggttggggaggtgttggacgaa
gcgcaacgacttgtcagtaatggcgtaaaagagctgttagtggtatctcaagatactggt
gcttacggtgttgatactaagtaccgaatgggattttggcaggggcgtccggttaaaaca
cggttcctcgatttgtgccagtcgttaggtgagttaggtgcttgggttcgtctgcactat
ctttatccttaccctcatattgatgatgcaattccattaatggccgaagggaaaattctc
ccttatctcgatattccattgcagcatgctagccctcgtattctgaaaatgatgaagcgc
ccgggtgcgattgataacaccttagcgcgtattaaaaaatggcgggaaatttgcccagac
ctaacgattcgaagtacctttattgttggctttcctggggagacagaagaagactttcag
ttactgttagactttatacaagaagcacagcttgaccgtgtgggttgctttaagtactca
ccagtagaaggtgctgtggcaaacgatttggcagagcctgtacctgaagaggtaaaggaa
gaacgtttggctaagtttatggcgttgcaagctaaaatcagtgcagatcgtttacagcta
aaagtgggtaagcgtatgcaggtgattgttgatgaggtgactgaagaaggttctgtagcc
cgcactaagggggatgcgccagacgtagatggtttagtcttcattgataatgtcaccgat
gtagagccgggcgatattcttgatgtagtgattgaagaagccgatgagcatgatatgtgg
gctcatttagcagactcttga
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