Alligator sinensis (Chinese alligator): 102372791
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Entry
102372791 CDS
T02922
Symbol
GRIN2C
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04020
Calcium signaling pathway
asn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102372791 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102372791 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asn04040
]
102372791 (GRIN2C)
Ion channels [BR:
asn04040
]
Ligand-gated channels
Glutamate (ionotropic)
102372791 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
102372791
NCBI-ProteinID:
XP_025053210
UniProt:
A0A3Q0G463
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MGRVVTHTLVLSMVLGCSAVIMDILLPGPEEPVVNVAVVFGGSSYPLHVRSRLTPQSFLD
MPLEIHPITVIVNNTNPSTLLTQICDILSSHKIHGIVFEDNIGTEAVAQILDFISSQTHV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQIDAQVMIVYCSREEAEYLF
QVAEEAGLIGPGYVWIVPSLTVGNMELPPVSFPIGLISVVTESWKMSLRQKVRDGVAIIA
MGASSYYRTRGHLPDVGKDCKTPPSTVTNSTFYSHMLNVTWEHRDFSFNEGGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPMSDNRHLTVATLEERPFVIVENT
DPTTGVCVRNTVPCRKQTNYTEGGDGPADPYTKLCCKGFCIDILKKLAKVVKFSYDLYLV
TNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFSGVQNLESPVRVHTPDVTANSAQANVLKMLQ
AAKDMVSTASVGSSLENATRTIENWTNRSENLQTTFSLRTPQLVVQNSSGLNRPINSSNM
AAAEKLGQAYAQRAVPQPLPAPQQSFVDSRLSASEKWRGITKQPQFLQPLKFRGSCSGDK
ALPGSTVSSFPHLLVKTTPPADCRNHVPLGNHVXXXXXXXXXXXSPRKPPRELPPPDIYK
EHKRSGVRGAGKETLPQNIPLGYREDRHREATPFARLLSEKRKGVESPFLPSSCTHDPFP
KADRTCRPLAPACKESEAADLPLLRKEKLGRRASLLRSAWEQNEKRHSLGLRRHDGKSSV
RGDMPDLFPRATLKQXXXXXXXXXXPAEALQPSYVCNRKCTEANPRLSWEGQRLVHSQPA
RLPSYREACLQHAAGLHRASSTVVHKQYAYMNSYTNLPVCLGQLYQGAPLLCEHSSAGCV
TRAPWSPGSRDYLVHEDSRRTMYFDSVYRDCRGRSRVEPAFLQMVNMEKRDLLAAQQMNS
PYPARSWRRISSLESEV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagttgtgacgcacactctggtgctgtccatggtgctgggctgttccgcggtc
ataatggacatcctgctgccgggtcccgaggagccagtggtcaacgtcgcggtggtgttc
gggggctcgtcgtaccctctccacgtccgcagccgcctgactccccagagcttcctggac
atgcctctggagatccaccccatcacggtgatcgtgaacaacaccaaccccagcaccctc
ctgacccagatctgcgacattctctccagccacaagatccacggcattgtctttgaggac
aacattggcacagaagccgtggcgcagatcctggacttcatatcctcccagacccacgtc
cccatcatcagcatcagcggaggctcggctgtagtcctgaccccaaaggagcctggctct
gcttttcttcagctgggggtctccatcgagcagcagattcaggtgatcttcaaggttttg
gaggaatatgactggggctcctttgcggtcatcaccagtctgtaccctgggtacaacatc
ttcctggacgtgatccgttccttcacagatgccagctactttggctgggaactccaggat
gtcctgacctttgagatgacccaggatgggagtaactccaaaacccagcgcctgctgcgg
cagatcgatgctcaggtgatgattgtgtactgctcgcgggaggaggctgagtaccttttc
caggtggcagaggaggccggcttgattggtcctggctatgtctggattgtgcccagcctg
acggtggggaacatggagctcccgccagtctctttccccatcggtctcatcagcgtggtg
accgagagctggaagatgagcctgcggcagaaggtccgggatggcgtggccatcattgcc
atgggggcgtcgagctactacaggacccgtgggcacctcccagatgtgggcaaggattgt
aagacacctcccagcacagtcacaaacagcaccttctacagccacatgctgaatgtgacg
tgggagcaccgggacttctccttcaacgaaggtggctacttggtgaggcccaccatggtg
gtgatctcactgaaccggcaccggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtaccctgtgtggccccgttacggctccttcctgcagcccatgtcggac
aatcgtcaccttaccgtagccaccctggaagagaggccctttgtcatcgtggagaacacg
gatcccaccactggagtctgcgtgcgcaacaccgtgccctgccggaagcaaaccaactac
accgaggggggagatgggcctgcagacccctacaccaagctctgttgcaagggcttctgc
atcgatatcctgaagaagctggccaaggtggtgaagttctcctacgacctctacctggta
accaatggaaagcatgggaagatagtgcgtggcgtctggaacgggatgattggcgaggta
tactacaagcgagcagacatggccattgggtccctcaccatcaatgaggagcgctctgag
attgtggatttctctgtgcccttcgtggagactggcatcagtgtcatggtggccagaagc
aacgggactgtctccccatctgccttcctagagccctacagtccagcggtgtgggtgatg
atgtttgtgatgtgtctcactgtagttgccgtcaccgtcttcgtgtttgaatatttcagc
cccgttggctacaaccagaacctaactagtggcaaaaagtccggtggcccctccttcacc
attggcaaatctatctggctgctctgggcactggtcttcaataactcggtgcccatcgag
aatccaaaaggcaccaccagtaagattatggtgctcatctgggctttctttgctgtgata
ttcctagccagctacacagctaacctggcggcatttatgatccaggagcaatacatcgac
actgtctctgggctgagcgataagaagttccagaggccccaggagcagtacccgcctttc
cggtttggcaccgttcccaatggcagcacagagaggaacattcggagcaactaccccgac
atgcacacgcacatggtgaaatacaaccagcgctcggtggaggatgccctgaccagcctc
aaaatggggaagctggatgcctttatctacgatgctgcagtgctgaattacatggctggg
aaggatgagggctgcaagctggtgaccatcggcagtgggaaagtctttgcgaccactggc
tatggcattgccctccagaaggattcccggtggaagagggcgatcgacttggctcttctg
cagttcctgggagacggggaaacccagaagctggagaccgtgtggctgtcaggcatctgc
cagaacgagaagaacgaggtgatgagcagcaagctggatattgataacatggctggtgtc
ttctacatgctcttggtggccatgggtttgagcctgctggtctttgcttgggaacacctg
gtgtactggaaactgcgacactcggtccccaagtcgcacaaacttgacttcctcctggcc
atcagcaggggcatttatagctgtttcagtggagtccagaatttggagagcccagtccgc
gttcacacaccagacgtcactgctaactcagctcaggccaacgtgctgaagatgctgcag
gctgccaaggacatggtatcaacggccagcgttgggagctccctggagaatgctactcgc
accattgagaactggaccaaccggagcgaaaacctccagaccacattctccctcaggacc
cctcagctcgtcgtgcagaacagcagtgggttgaacaggcccatcaactcctccaacatg
gcagctgcagagaagctggggcaagcctacgcccagagggccgttccccaacccctccct
gcccctcagcagtcctttgtggactcccggctgtcagccagtgagaaatggagggggata
accaagcagcctcagtttctgcaacccctgaagtttcgaggaagctgctccggggataag
gctcttccaggttccaccgtgagcagcttcccccacctcctggtgaagaccacccctcca
gccgactgtagaaaccacgtgccgctggggaaccacgtgnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnngctcaccacggaagcctccaagggagcttcctccaccagacatctacaaa
gagcacaagcgctcaggggtcaggggggccgggaaggagaccctcccccagaacattccc
ctggggtacagggaagacagacacagggaagcaaccccctttgcaaggctgctttccgag
aagaggaaaggcgtggaaagccctttcttgccttcctcttgcacccatgaccccttccca
aaagcagataggacttgcagacctttagcaccagcgtgcaaagagtcagaagcagcagat
ctccctttgctgaggaaggagaagctgggccggagagctagcttgttgcgttctgcctgg
gagcagaacgagaaacgccattccctgggcctgcggaggcacgatggcaaatcatccgtg
cgaggcgacatgccggacctctttcccagagccactctgaagcagnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnncctgctgaagcccttcagcccagctacgtgtgcaataggaaatgc
accgaggcaaaccccaggctctcctgggagggccaacgactcgtccattctcagccggcc
aggctgccctcctacagggaagcgtgcctacaacatgccgcaggcctgcaccgggcctct
tccacagtggtgcacaaacaatacgcctacatgaactcctataccaacctgcctgtgtgc
ttggggcagctctaccagggggctcccctgctctgcgaacactccagtgccgggtgcgtc
actcgggctccctggtcgcctggaagcagggactacttggtccacgaggacagccggagg
accatgtattttgacagtgtatacagagactgcagaggtcgaagcagagtggaaccagcc
tttctccagatggtcaatatggagaagagggacctattggcagcccagcaaatgaacagc
ccctaccctgccaggtcttggagacgaatctcaagcctggagtcggaggtgtga
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