Atlantibacter subterranea: NLZ15_14180
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Entry
NLZ15_14180 CDS
T08300
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
asub
Atlantibacter subterranea
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asub03009
]
NLZ15_14180 (rimO)
Enzymes [BR:
asub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NLZ15_14180 (rimO)
Ribosome biogenesis [BR:
asub03009
]
Prokaryotic type
ribosomal protein modification factors
NLZ15_14180 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UTJ45998
LinkDB
All DBs
Position
3003053..3004378
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AA seq
441 aa
AA seq
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MSNVSHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LADAGVKEILVISQDTSAYGVDVKHRMGFHNGEPVKTSMVGLCEQLAKLGIWTRLHYVYP
YPHVDDVIPLMAEGKVLPYLDIPLQHASPRILKLMKRPGSVDRQLQRIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPDQIPEEVKEDRW
NRFMQLQQQISAERLQEKVGREIMVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETGVKP
GDIIRVKVENADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtatcacaccagccgaaaatcggcttcgtctccctgggctgcccgaaaaac
ctggtggactctgaacgcatcctgactgaactgcgtaccgaagggtatgacgtggtgccg
agttacgataacgccgatatggtgatcgtcaatacctgcggctttatcgacagcgcggtg
caggagtcgctggaagccattggcgaagcgttaaacgagaacggcaaggtgattgtgacc
ggctgccttggcgcgaaagaagatcaaatccgcgaagtgcatccgaaggtgctggaaatc
accgggccgcacagctacgagcaggtgctggaacatgtgcatcactatgtgccgaagccg
aagcacaacccgtttttaagcctggtgcctgaacagggcgtcaagctgaccccgcgccac
tacgcgtacctgaaaatttccgaaggctgcaaccaccgctgcaccttctgcattatcccg
tcgatgcgcggcgatctggtcagccgcccgattggcgaggtgctgtctgaagccaaacgc
ctggccgacgcgggtgtgaaagagattctggtgatctcccaggatacctccgcttacggc
gtcgatgtgaaacaccgtatgggctttcataacggcgagccggtaaaaaccagcatggtg
ggactgtgtgaacagctggcgaaactgggcatctggacgcgtctgcattacgtgtacccg
tacccgcacgttgacgatgtgatcccgctgatggccgaaggcaaagtgctgccttatctg
gacatcccgttacagcatgccagcccgcgcatcctgaagctgatgaagcgcccaggttcg
gttgaccgtcagctacaacgcatcaagcagtggcgcgagatttgcccggaactgaccctg
cgctcgacctttatcgtcggcttcccaggcgaaaccgaagaagacttccagatgctgctc
gacttcctgaaagaggcccgtctggaccgcgtgggctgctttaaatacagcccggttgaa
ggcgctggcgctaacgaactgccggaccaaatcccggaagaggttaaagaagatcgctgg
aaccgctttatgcagctccagcagcagatttccgccgaacgcctgcaggaaaaagtgggc
cgtgaaatcatggtcatcatcgatgaggtggacgaagaaggcgcgattggccgcagcatg
gcggacgccccggaaatcgacggcgcggtctacctgaacggcgaaactggcgttaagccg
ggcgacattatccgcgtaaaagtggaaaacgccgacgaatacgatctgtggggcagccgc
gtttaa
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