Agrobacterium tumefaciens S33: AWN88_25295
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Entry
AWN88_25295 CDS
T04213
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata00190
Oxidative phosphorylation
ata03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AWN88_25295
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWN88_25295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ata03019
]
AWN88_25295
Enzymes [BR:
ata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AWN88_25295
Messenger RNA biogenesis [BR:
ata03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AWN88_25295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
PLDc
Motif
Other DBs
NCBI-ProteinID:
AMD61706
LinkDB
All DBs
Position
linear:2905056..2907254
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AA seq
732 aa
AA seq
DB search
MDAVAQEDFNKVQPQTEGENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFL
SISAANLDEFFMVRVAGLEGQVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAV
LQQYLAKEEIYIVRPAALSDEDRNWLETEFEERMFPVLTPLSIDPAHPFPFIPNLGFSMG
LQLDSVNGREPMTALLRLPPALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGS
GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPQSLRQFVVHELGVP
DNRVAVLPGLLALNTISEIVRAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHH
PYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKAR
FDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA
KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAVSPYTLRARILKHIHEEIEHA
KRGAPAAIWMKMNSLVDPEIIDALYHASAAGVEVDLVVRGICCLRPQVPGLSDNIRVKSI
VGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDRRVETLVPLTNPTVHEQVLSQ
IMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI
AGLISSRKKQAE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtcgcgcaggaagatttcaacaaggttcagccgcagaccgagggcgagaac
ctctgggatagccccgcgcgtttcatcaaccgcgaattctcctggctccagttcaaccgc
cgtgtccttgaggaaacgctgaacaccgatcacccgctgctggagcggctgcgtttcctg
tccatctcggcggccaatctcgatgagttcttcatggttcgcgtcgccggcctcgaaggc
caggtgcgccagaagatcaccgtcaggaccccggacggcaagaccccggcagaacagctc
gaagatattctgaaggaaatcgacaacctgcagatggagcagcaggcctcgcttgccgtt
ctgcagcaatatcttgccaaggaagaaatctacatcgtacgcccggctgcgctttcggat
gaggatcgcaactggctggagaccgagtttgaggaacgcatgttcccggtgctgacgccg
ctctccatcgatccggcgcacccgttccccttcattcccaatctcggcttttccatgggc
ctgcagttggacagcgtcaacggccgcgagccgatgacggcgcttttgcgcctgccgccg
gcgctcgaccgcttcgtgcggctgccggatgaaaagaacgccatccgctacatcacgctc
gaggatgtggtcggtctgttcattcaccggctctatcccggctataccgttcgcggttcc
ggcacgttccgcatcatccgcgatagcgatatcgaggtggaggaagaggccgaagatctg
gtgcgtttcttcgaaagcgcactgaaacgccgccgccgcggttccgtcatccgcatcgag
accgatagcgaaatgccgcagtcgctcaggcagttcgtggtgcacgaactcggtgtgccg
gataatcgcgtcgcggttctgcccggtcttctcgcgctcaacacgatctcggaaatcgtg
cgtgccccgcgcgacgacctgaaattcgagccctacaatgcccgtttcccggagcgcgtt
cgtgaacatgccggcgattgcctcgctgctatccgcgaaaaggacatggtggttcaccat
ccctatgaaagcttcgacgtggtggtgcagttcctcctgcaggctgcgcgcgatcccgaa
gtactcgccatcaagcagacgctttaccgcacctccaacgacagcccgatcgttcgcgcg
ctgatcgatgccgcggaagcaggtaaatccgtcaccgcgctggtcgagctcaaagcgcgt
ttcgacgaggaagcaaacatccgctgggcgcgcgatctggagcgcgccggcgtgcaggtc
gtgttcggcttcatagaactcaagacccacgccaagatgtcgatggtggtgcgccgcgag
gatggcaagctcaggacctactgccaccttggcacgggcaactatcacccgatcacggcc
aagatctataccgacctgtccttcttcacctgcaacccgaagatcgcccacgacatggcg
aatatcttcaacttcatcacgggttacggcgaaccggaggagggcatgaagctggccgtc
tcgccctatacgttacgcgcgcgcatcctcaagcatattcacgaggaaatcgagcacgcc
aagcgcggcgcgccggcggcgatctggatgaagatgaattcgcttgtcgatccagagatc
atcgatgcgctctaccatgccagcgccgcgggtgttgaggtggacctcgtcgtgcgcggc
atctgctgcctgcgcccgcaggtgcccggcctgtcggacaatatccgcgtcaaatccatc
gtcggccgcttcctggagcacagccgcatcttctgcttcggcaatggtttcggcctgccg
tcggacaaggcgctggtctatatcggctccgccgacatgatgccgcgcaatcttgaccgc
cgcgtggaaacgctggtgccgctgaccaatcccaccgtgcatgagcaggttctttcacag
attatgctgggcaatctcattgacaaccagcagagctacgagatacttgcggacggaacg
tcgaggcgcatcgaggtgcgtaaaggcgaagaaccgttcaacgcgcagcactatttcatg
accaatcccagcctttccggacgtggtgaagccctgaaatccagtgcgcccaaattgatt
gccgggttgatttcgtcccgcaagaaacaggctgaatga
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