Aethina tumida (small hive beetle): 109609474
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Entry
109609474 CDS
T06105
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109609474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109609474
Enzymes [BR:
atd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109609474
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109609474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
109609474
NCBI-ProteinID:
XP_019881700
LinkDB
All DBs
Position
1:complement(join(78959831..78960049,78960114..78960406,78960462..78960744,78960803..78961156,78961213..78961499,78964647..78965480,78965552..78965844,78965919..78966091,78966148..78966387,78966445..78966774,78966843..78966914))
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AA seq
1125 aa
AA seq
DB search
MLQNPVLKNLTDPNFGKPPKHQNIILQQLGLPHITSFNYMVNEGLSKAVADLNPVEFELN
NKRLKFAITDYNFQLPEVPLGTVGVKNRYVYPTECRQRAATYKGKFSVKVDWYIDDVQQT
SFDKDMGEIPIMIKSNRCHLESMSPKELVKHGEHEQEWGGYFVVKGHERLVRMLLMTRRN
YPVAIRRSGWKMRGSLFSDSGISIRCVKDDQTATTNVLHYVTDGNAKLMFSYRKVLYYAP
LCLILKCLVDYTDHYIFQKLTQGFEDDSYYIDCVQNMLRGVHMENLHSSEECKAYIGKMF
RVKFFECPEWWPDIEIGEFILKKCILIHLDSNEDKFNMLVFMTQKLFTFAQDKCKLEGAD
AVMMQELLLGGHLYLQIVKEKLQTWLTNLRYTLSKVSNQSQFSCSQQDIQKAAKFNGGLE
NVIQNFLATGNVTSNSGLGLMQDKGLTIVAENINRMRYMSHFRAVHRGAFFQEMRTTEAR
QLLPDAWGFICPVHTPDGTPCGLLNHLTMNCQVTDIPNAVQVENIPILLTELGMVPLQFF
STLDLKNWYVVQLDGRIIGYINKDCAQKLVDNLRLYKIKGDRVPNTLEIVLVVRKETATQ
YPGLYLFTGPARMMRPLINLVANQIELVGTFEQVYLDICVAPEESYPGITKHMELSKTAF
MSNLAMLIPMPDCNQSPRNMYQCQMGKQTMASPCHNWDLQSETKLYRLQTPSSPLFRPVH
HDNIGLDDFAMGTNAIVAVISYTGYDMEDAMIINKASDERGFAHGSIYKSEFVEVDHQHS
YFCRDPKNTQLNEYMDTDGLPIIGKKIQAGDPLYCYYSADTSNYVVRKFGGKEDCYVHSV
KLCGDFSIKALKTACITFRVPRNASVGDKFASRAGQKGICSQKWPAEDLPFTETGLVPDI
VFNPHGFPSRMTIAMMIEIMAGKSAALHGLVHDATPFKFNETDTAIDYFGRLLETGGYNY
YGTETMYSGIDGREMQAEIFFGIVHYQRLRHMVSDKWQVRSTGPIDVLTRQPLKGRKRGG
GVRFGEMERDSLISHGASFLLQDRLLHCSDRTTASICTACGSILGPITVVTAKADKPHLT
ETRNTCNLCGTNRNISEIQIPYIFKFFITQMASCNINVKIECEKV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaatccagttttgaagaatttaaccgatccgaatttcggaaaaccacccaaa
catcaaaacatcattttacaacaactcggtttaccacatataacaagtttcaactatatg
gtaaatgaaggattgagcaaagcagtagcagatttgaatccggtggaattcgaattgaat
aataaaaggttaaagtttgctataaccgactataattttcaactgcctgaggtacctttg
ggaactgtcggtgtgaaaaaccgctatgtttaccccacggagtgcagacaaagagctgca
acctacaagggcaagttctctgtaaaggtagattggtatatagatgatgtgcaacaaacg
tcctttgataaggatatgggggaaatccctatcatgatcaagtccaaccgttgtcatttg
gaatcaatgtccccaaaagaattggtgaaacatggagagcatgaacaagaatggggtggc
tattttgtggttaaaggccatgagagacttgtgaggatgttactaatgactagaaggaac
tatccagtagccataagaagatctggatggaaaatgcgaggctcgttattttcagatagt
ggtatatcaattcggtgtgtcaaagatgatcaaacagctacaacaaatgtgctgcattat
gtaactgatggaaatgcaaagttgatgtttagttacagaaaagtgttgtattatgctcct
ttgtgtctgatattaaaatgtctggttgattatactgatcattatatttttcaaaagttg
acccaaggttttgaggatgattcctactatattgactgtgttcaaaatatgttgagaggg
gttcatatggaaaatttgcactccagtgaagaatgtaaagcttatataggtaaaatgttc
agagtaaaattctttgagtgtcctgaatggtggcccgacattgaaatcggcgaatttata
ttgaaaaaatgcatcctaatccacttggattcaaatgaagacaaattcaacatgctggta
ttcatgacccaaaaactgttcacatttgcccaagataaatgcaaattagaaggagctgat
gctgtcatgatgcaggagttgctattgggtggccatttatatctgcaaatcgtgaaggaa
aaactccaaacctggctaacaaacttgcgctacaccctcagcaaagtctccaaccaatct
caattcagttgcagccaacaggacatccaaaaagcagcgaaattcaatggaggcctggaa
aatgtaatacaaaatttcctggcgactgggaacgtgacgagcaactcgggattaggtttg
atgcaggacaaaggtctaacaatcgtggcggagaacattaacaggatgcgatacatgtcg
cattttagggcggtacacagaggcgcattcttccaggaaatgcgaaccacggaggcgaga
cagttgttgccggacgcttggggttttatttgtcctgtacacactcctgatggtactccg
tgcgggttactcaatcatttgaccatgaattgtcaagtaactgatattcctaatgcagta
caagtcgagaacataccaattttgttaactgagttgggaatggtgcccttgcaatttttc
agcacgttagatttgaagaactggtatgtagtgcaattggatggcagaattattgggtat
attaataaagattgcgcccaaaaattggtggataacctaagattatataaaattaaggga
gatagagtaccaaacacgttggaaatcgtgcttgtggtcagaaaggagactgcaacccag
tatccaggtttgtacttgtttacgggaccggcgagaatgatgagaccacttattaatttg
gtggcaaatcagattgaactcgttggaacttttgagcaggtttatttggatatttgtgtc
gcaccagaagaatcttatccaggtataacaaaacatatggaactctcgaagacagccttc
atgtcaaatctagctatgttaatcccgatgcctgattgcaaccaatcgccaagaaacatg
taccagtgccagatgggcaaacaaaccatggcatcgccttgtcataactgggacttgcaa
tcagaaaccaagttgtaccgattacaaaccccttcatcacctcttttcagacctgtacac
catgataacatcggtctggacgatttcgcaatgggaactaatgctattgttgctgttatt
agctacaccggatacgacatggaagatgcgatgataatcaacaaggcttcggacgagcgc
ggatttgcacatggttccatctacaaatcagaattcgtagaggtcgaccatcaacactcc
tacttttgcagagacccaaaaaatacacaattaaacgaatacatggacacggacggttta
ccgatcatcggtaaaaaaatacaggcaggagatcctttgtattgttattatagcgctgac
acttcgaattacgtggtcagaaagttcgggggaaaagaagattgttacgtacacagcgtc
aagttgtgcggggattttagcattaaggcgttaaaaacagcctgcatcactttcagagta
cctagaaacgccagtgtgggagataaattcgctagtagggcaggtcaaaagggtatttgc
tcgcagaaatggccagctgaagatttaccttttacggaaacaggtcttgtaccagatatt
gtgtttaatcctcatggttttccatctcgtatgaccattgctatgatgatcgaaattatg
gctggaaaatcggctgcattgcatgggttagtgcatgacgccacaccttttaaattcaac
gaaactgatacagccattgactattttggaaggctcttagaaactggcggttataattat
tacggaactgaaacaatgtattcggggatagatggcagagaaatgcaggcggaaatattc
tttggaattgtacattatcaacgtttaagacacatggtttcagacaaatggcaagtgaga
tcaacgggtccgattgacgttttaactcgtcaacccttgaagggtagaaaacgaggtggt
ggtgtacgtttcggagaaatggaacgtgactctctcatcagtcacggggcttctttctta
ctgcaagacagattgttgcattgttctgaccgcactaccgcgagtatttgtacggcttgt
ggctcgatcttaggaccgataactgtggtgactgcaaaagcggacaaaccacatttaact
gaaacaagaaacacgtgcaacttatgcggaacaaatcgtaacatttctgaaatacaaatt
ccgtatattttcaaattctttattacgcaaatggcttcttgtaatatcaatgttaaaata
gaatgcgagaaagtttaa
DBGET
integrated database retrieval system
