Arabidopsis thaliana (thale cress): AT1G29940
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Entry
AT1G29940 CDS
T00041
Symbol
NRPA2
Name
(RefSeq) nuclear RNA polymerase A2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT1G29940 (NRPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G29940 (NRPA2)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT1G29940 (NRPA2)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AT1G29940 (NRPA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
839872
NCBI-ProteinID:
NP_564341
TAIR:
AT1G29940
UniProt:
F4I366
A0A178W5B4
LinkDB
All DBs
Position
1:complement(10479007..10486824)
Genome browser
AA seq
1178 aa
AA seq
DB search
MVVNAKDSTVPTMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELS
IWLENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFD
FGQFPIMLMSKLCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSM
IRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVL
KALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH
LGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLI
NKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASF
AGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRK
SVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPS
VIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSDNIELIGPFEQVFMEISC
PDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQA
LQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKS
SVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRSTNKAEHFRIDADGLPSVGQKLYPD
EPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPIIGDKFS
SRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGK
FVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIF
MGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYL
LHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTS
KGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaacgcgaaagactcgacggttccaacgatggaagacttcaaggagcttcac
aatctcgttactcatcatatagagtctttcgattacatgacactgaaaggactcgatgtt
atgttcaatcgaatcaaacccgtttctgtttacgatccaaacaccgagaatgaattgagc
atttggttagaaaatcctctagtatttgctccacagaaggagagttttaaatcaacatca
aggaaagagcctttgcttccctttgagtgtaggcaagcgaagatttcgtacacaggaacg
tttatggctgatgtttgctttaagtataatgatggagtcgttgttagagacaagtttgat
tttgggcaatttcctattatgctcatgtcaaagctttgtagcttaaagggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttattttgaat
gggattgagagagtgtttcgatgtgttattgcaccaaagcggaaccatccaacaagtatg
attcggaactcattccgtgatcgtaaggaaggatactctagcaaggcagttgtcactagg
tgtgttagggacgaccagtcatctgttactgttaaactgtattatcttcgcaatggaagt
gccagagttggattttggatagtgggaagggaatatttgcttcctgtcggccttgttctc
aaggctctaacgaattcctgcgatgaggaaatatacgaaagcctgaactgttgctacagt
gagcattacggaagaggggatggagctattggaacccaacttgttcgtgagagagccaaa
attattcttgatgaagttcgagacttgggtctttttacccgtgaacagtgccggaagcac
ttaggacagcattttcaacctgttcttgatggggtaaaaaaagaaagcctttctatcgtt
gctgaagctgtgctcagggattatttatttgttcaccttgacaatgatcacgacaagttc
aatttgctcatcttcataattcagaagctctattctctggtggatcagacttctttacct
gacaatccggattctttgcaaaatcaggaaattttagtcccaggtcacgttataactatt
tacctcaaggaaaaacttgaagaatggctgcggaagtgtaaaagtcttcttaaagatgag
ttggataacacgaactcaaaattttcctttgaaagccttgctgatgtcaagaagcttatt
aacaaaaatcctcccaggagtattggtacgtcaattgaaacattgttaaagacaggagcg
ttgaaaacacagtctggtttggatttacagcagagagcaggttacactgttcaggctgag
agactgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgcttctttt
gctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttggggttttctttgc
cctgttcacactcctgatggaacaccttgtggattactgaatcatatgactcgtactagc
cgaatcacttctcagttcgattccaagggaaacatcagagattttctgaaaataagaaag
tcagttgttgatgttcttactggggcgggtatggtaccttcattgccaaagctagtacga
gctggaccaccaaaagtcatccatgttcttttagatggtcaagttgtaggcacgctatct
tctaacctagtcacgaaagttgtctcttatatacggagactgaaagtggaggctccttca
gtgattcctgaagacctcgaagtgggatacgtacctacaagcatgggtggatcttaccct
ggattgtatttggcatcatgtcccgcaagattcattaggcctgttaaaaatatatctata
ccttctgataatattgaactgattggaccatttgaacaggtttttatggaaataagctgt
cctgatggtggaaatggaggaaggaataactcttccctagcaactcacgaggaaattcat
ccaaccgggatgataagtgtggttgctaatcttacaccttggtcagatcataaccaaagt
ccccgtaacatgtatcagtgtcagatggcgaaacaaaccatggcgtactctactcaagca
ctccaatttcgtgccgaccagaagatttaccacctgcagactcctcaatcccctgtggtc
cgcacaaaaacatacaccacttacagtattgatgagaatcctacagggactaatgcaatt
gttgctgtcctcgcacatacaggatttgatatggaagacgcgatgattttgaacaaatca
tctgtggagcggggaatgtgccatgggcaaatataccagacagaaaatattgatctttca
gatcagaatagccgatttgatagtggttctaaaagttttaggaggagtactaacaaagca
gaacattttcgtatcgatgctgatgggttaccatctgttggacagaaattatatccagat
gagccgtattgtagtatctatgatgaggtaactaacaaaacaaggcacatgaagcgtaaa
ggtaccgaccctgtcatagttgactttgtctctgtcgacatgaaaagcaagaaacatcct
caaagggcgaatattcgtttccggcatgccagaaaccccataatcggtgacaagttcagc
agtagacatgggcaaaagggtgtttgttctcaattgtggcctgatattgacatgccattt
aatggagttactggaatgcgtccagatctcatcattaacccgcatgctttcccatcaaga
atgacaattgctatgcttttggaatctattgctgctaagggaggtagtttgcatggaaag
tttgtagatgcaacaccgtttcgtgatgcagtaaaaaaaacaaacggagaagaggagagc
aagtccagtttgcttgttgatgatcttggctccatgttaaaggaaaaagggttcaaccat
tatggtaccgagacattgtatagtgggtatttaggagtagaactgaagtgtgagatattt
atggggcctgtttactaccagagactgcgtcacatggtctcagacaaattccaggttaga
tctacgggacaagtggatcagctaactcatcagccaataaagggaagaaaacgaggtggt
gggattcggtttggtgaaatggagcgagactcactacttgctcatggagcctcctatcta
ttacacgacaggcttcatacatcttcagatcaccacattgcagatgtgtgttcgctatgt
ggaagcttgctcacatcatctgttgtgaacgttcaacagaagaagcttattcaagaaatt
ggaaagttacctcctggtagaactccaaagaaggtaacttgctattcttgcaagacaagt
aaaggcatggaaacagttgcaatgccctatgtgttcaggtacttggctgcagagttggct
tcaatgaatattaagatgactcttcagttaagcgatagagaaggagtaactgattaa
DBGET
integrated database retrieval system
