Arabidopsis thaliana (thale cress): AT3G57660
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Entry
AT3G57660 CDS
T00041
Symbol
NRPA1
Name
(RefSeq) nuclear RNA polymerase A1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT3G57660 (NRPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G57660 (NRPA1)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT3G57660 (NRPA1)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AT3G57660 (NRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
824935
NCBI-ProteinID:
NP_191325
TAIR:
AT3G57660
UniProt:
Q9SVY0
LinkDB
All DBs
Position
3:21353497..21363201
Genome browser
AA seq
1670 aa
AA seq
DB search
MAHAQTTEVCLSFHRSLLFPMGASQVVESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNP
FPGGLYDLKLGPKDDKQACNSCGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACF
FCHHFMAKPEDVERAVSQLKLIIKGDIVSAKQLESNTPTKSKSSDESCESVVTTDSSEEC
EDSDVEDQRWTSLQFAEVTAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSD
VGANVIRGLKLKKSTSSVENPDGFDDSGIDALSEVEDGDKETREKSTEVAAEFEEHNSKR
DLLPSEVRNILKHLWQNEHEFCSFIGDLWQSGSEKIDYSMFFLESVLVPPTKFRPPTTGG
DSVMEHPQTVGLNKVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQ
RDSSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPER
VTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELG
KTCDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYN
ADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDT
FLDKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQV
ITAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKEIDESWKQNLNEDK
LHIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGV
DDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESA
LASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHL
GQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLV
DTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFK
ELTINQDMVLQKCSEDMLSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELL
KLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM
TAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSI
HKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIHNDVTGP
IAGNETDNDDSVSGKQNEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNE
PSSISGVEDPEMDSENEDTEVSKEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRRKFVRA
KSDRHIFVKGEGEKFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDP
QVIYHGDNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIF
GVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCR
MTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgctcaaaccacagaggtgtgtttgagttttcaccgctctttattgtttccc
atgggagcttcccaggtggtcgaatctgttagattcagtttcatgacagagcaagatgtt
cgaaagcatagtttcctgaaagttaccagtcctattttacacgataacgtgggcaatcct
tttcctggtggtctctatgatcttaaattaggtcctaaagatgataagcaagcttgcaat
tcatgtggtcagctcaaacttgcttgtccaggacattgtggtcatatcgagcttgtcttt
cctatttaccatcctttgctcttcaatcttcttttcaatttcttgcagagggcctgtttc
ttctgtcatcactttatggcaaaaccggaagatgttgaaagagctgtttctcagctgaaa
ctcatcattaaaggtgatatagtttccgcgaagcaattggagtccaacactcccactaag
tctaagtctagtgatgaaagctgtgaatcagttgtaaccactgattcatccgaagaatgt
gaagattctgacgtggaagatcagagatggacatctcttcagtttgctgaagtcactgct
gtcttgaagaattttatgaggttgtcatcaaagtcgtgtagtagatgcaaaggaattaat
cctaaactcgagaagcctatgttcggatgggttcgcatgagagcaatgaaagactccgat
gttggagctaatgtcattcgagggcttaagctaaagaagtccactagcagtgttgaaaat
ccagatggctttgatgatagtggcattgatgcattatcagaagttgaagatggtgataaa
gagacaagagaaaagtccacggaagtagctgcagagtttgaagagcataattctaaaaga
gaccttttaccgagtgaggtcaggaatatcttaaaacatctgtggcagaatgagcacgag
ttttgctccttcattggtgatctttggcagagtgggtctgaaaaaattgactactctatg
ttttttttggagagtgttcttgtgccccctactaaatttagacctccaacaacaggaggt
gatagtgttatggaacatcctcaaaccgtaggactaaataaggtcatagaatccaataat
atactcgggaatgcctgtactaacaaattagatcagtcgaaggtaattttcagatggagg
aatcttcaagaatcagtcaatgtcttgtttgatagcaaaactgccacagttcaaagccag
agagacagctctggaatatgtcaattgctggagaagaaagaggggctatttcggcaaaaa
atgatgggaaagagagtgaatcatgcgtgcagatctgtgatatctccagatccttatatc
gctgttaatgacatcggaattcctccttgttttgctttgaaattgacgtatcccgagagg
gtgactccttggaatgtggagaagttaagggaagctatcattaatggtcctgacattcat
cctggagctacacattactctgacaaatcatctacaatgaagttgccctctaccgaaaaa
gcacgaagggcaattgcaagaaaattactgtcctcacgaggagccactacagaacttggg
aaaacttgtgatatcaactttgaaggtaaaactgtccatcgacatatgcgagatggtgac
atcgtccttgtgaatcgtcagccaacattacataaacctagcttaatggcgcacaaggtc
cgtgttctgaagggggagaaaacacttcgtctccactatgcaaattgcagtacatacaat
gcagattttgatggtgatgagatgaatgtgcattttccacaagatgagatttcacgtgct
gaggcctacaatattgtcaatgctaacaaccaatatgctaggccttctaatggcgagcca
cttcgagctttaattcaggatcatattgtcagttccgttttgcttactaaaagggacaca
tttttggacaaagatcattttaatcagcttctcttcagttccggtgtcactgacatggta
ctcagtactttttctggaagatctggcaagaaagtcatggtatcagcttctgatgcagaa
ctgttgacagtcacgcctgctattttgaagccagtgcctctttggactgggaagcaggtc
atcactgcagtgttgaatcagataaccaaaggtcacccgcctttcaccgtagagaaagct
accaaacttccagttgatttcttcaaatgtagatctagagaagtaaaacctaacagtgga
gatttgaccaaaaagaaagagattgacgagtcatggaaacagaatcttaatgaagataaa
ttgcacatcagaaaaaatgaattcgtctgcggtgtgatcgacaaggctcagtttgctgac
tatgggctggttcatacagtgcatgagctttatggttcaaatgctgcaggaaatctgctc
tctgtttttagtcgtctctttacagtctttcttcagacccacggtttcacctgtggcgtt
gatgatcttattattttaaaagatatggatgaagagaggacgaagcaacttcaagaatgt
gaaaatgttggtgaaagagtactccgtaaaacctttggcatagatgttgatgttcagata
gatcctcaggacatgagatccagaatagaacgaattctttatgaggacggggaatctgct
ttggcatctttggacaggagcatcgtaaattatctcaaccagtgttcaagcaagggtgtg
atgaacgatttactgtctgatgggttactaaaaacacctggaaggaattgtatatcgcta
atgacgatatctggggctaagggcagtaaggttaacttccagcaaatctcttcacacctt
ggccagcaagatttagaaggaaaaagagttccccgaatggtttctgggaagacattacct
tgtttccatccatgggactggtcccctagagctgggggatttattagtgacagattccta
agtggtcttcgcccccaagaatattacttccattgcatggctggacgagaagggttagtt
gatactgcagtgaagacatcgcgtagtgggtatctgcaaagatgcttgatgaaaaatctt
gagagtcttaaagtcaactatgattgtactgtccgggatgctgatgggtccatcattcag
ttccaatatggtgaagatggtgtggatgttcatcggtctagcttcattgaaaagttcaaa
gaactgacaataaatcaagatatggtccttcaaaaatgcagtgaagacatgctatctgga
gctagtagttacatcagtgatctgcctattagtcttaagaagggagctgagaagtttgta
gaggcaatgcctatgaatgaacgtattgcttctaaatttgtgagacaagaagaactactg
aagctggtgaagtcaaaattctttgcaagtcttgcgcagccaggggagcctgtaggtgta
cttgctgctcaatctgtaggagagccatcaacacagatgacgttgaatactttccatctt
gctggacgtggagagatgaatgtgacacttggaattccacgtttacaagagattttgatg
acagctgcagcaaacattaagacaccaataatgacatgcccgttgctgaaaggcaaaaca
aaggaggatgcaaatgatattactgataggttgaggaagataacggtggcagatataata
aagagcatggaactgtcagttgtaccatatacggtttatgagaatgaagtttgtagtatt
cacaagcttaagataaatctctataagccagagcattatccgaagcacaccgatatcact
gaagaagactgggaagagacgatgagggctgtatttttaaggaagttggaggacgctata
gagacccacatgaaaatgctccatagaataaggggcatacacaatgatgtcacaggtcca
atagctggaaatgaaactgataatgatgattctgtaagtggaaagcagaatgaagatgat
ggtgatgatgatggcgagggtacagaagttgatgatcttggttcagatgcacagaaacag
aagaaacaagaaacagatgagatggattatgaggaaaactctgaagatgagacgaacgaa
ccatcttcaatcagtggagtagaggaccctgagatggatagtgagaatgaggacacagaa
gttagcaaggaagatactccggaaccgcaggaagagtctatggaacctcaaaaagaggta
aaaggggtaaagaatgtcaaagaacagagtaaaaaaaagagacggaaatttgttcgagct
aaaagtgacagacatatctttgtgaaaggtgaaggagagaaatttgaggtccatttcaag
tttgctacagatgaccctcatattttacttgcccagattgctcaacaaacggcgcagaag
gtttacatccagaattctgggaagattgaacgatgcacagtggctaattgtggtgatcct
caggtgatctaccatggagacaatccaaaggagagaagagaaatatccaacgatgaaaag
aaagcctcaccagctctccacgcatcaggagttgatttccctgcactgtgggaattccaa
gataaacttgacgtcaggtacttgtatagcaacagcattcacgatatgctcaacattttt
ggagttgaagcagctagagaaacaataatcagggaaataaaccacgtcttcaaatcatat
ggcatttctgtaagcatcagacacttgaacctcattgcagattatatgaccttttccggt
ggataccgaccaatgagccgtatgggaggaattgcagaatcaacttcaccattctgcaga
atgacttttgaaacagccactaagttcattgtccaagcagctacttatggagaaaaggac
acattagaaaccccctctgctagaatctgtcttggcttgcctgcgctttcaggaactgga
tgcttcgatttgatgcagagagtggagctctga
DBGET
integrated database retrieval system