Arabidopsis thaliana (thale cress): AT4G02780
Help
Entry
AT4G02780 CDS
T00041
Symbol
GA1
Name
(RefSeq) Terpenoid cyclases/Protein prenyltransferases superfamily protein
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00904
Diterpenoid biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
AT4G02780 (GA1)
Enzymes [BR:
ath01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
AT4G02780 (GA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
828182
NCBI-ProteinID:
NP_192187
TAIR:
AT4G02780
UniProt:
Q38802
Structure
PDB
LinkDB
All DBs
Position
4:complement(1237671..1244822)
Genome browser
AA seq
802 aa
AA seq
DB search
MSLQYHVLNSIPSTTFLSSTKTTISSSFLTISGSPLNVARDKSRSGSIHCSKLRTQEYIN
SQEVQHDLPLIHEWQQLQGEDAPQISVGSNSNAFKEAVKSVKTILRNLTDGEITISAYDT
AWVALIDAGDKTPAFPSAVKWIAENQLSDGSWGDAYLFSYHDRLINTLACVVALRSWNLF
PHQCNKGITFFRENIGKLEDENDEHMPIGFEVAFPSLLEIARGINIDVPYDSPVLKDIYA
KKELKLTRIPKEIMHKIPTTLLHSLEGMRDLDWEKLLKLQSQDGSFLFSPSSTAFAFMQT
RDSNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHR
YWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFEKEGEFFCFVGQSNQAV
TGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEI
PWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEW
DIFQKWYEENRLSEWGVRRSELLECYYLAAATIFESERSHERMVWAKSSVLVKAISSSFG
ESSDSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDL
FMSHGRDVNNLLYLSWGDWMEKWKLYGDEGEGELMVKMIILMKNNDLTNFFTHTHFVRLA
EIINRICLPRQYLKARRNDEKEKTIKSMEKEMGKMVELALSESDTFRDVSITFLDVAKAF
YYFALCGDHLQTHISKVLFQKV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcagtatcatgttctaaactccattccaagtacaacctttctcagttctact
aaaacaacaatatcttcttctttccttaccatctcaggatctcctctcaatgtcgctaga
gacaaatccagaagcggttccatacattgttcaaagcttcgaactcaagaatacattaat
tctcaagaggttcaacatgatttgcctctaatacatgagtggcaacagcttcaaggagaa
gatgctcctcagattagtgttggaagtaatagtaatgcattcaaagaagcagtgaagagt
gtgaaaacgatcttgagaaacctaacggacggggaaattacgatatcggcttacgataca
gcttgggttgcattgatcgatgccggagataaaactccggcgtttccctccgccgtgaaa
tggatcgccgagaaccaactttccgatggttcttggggagatgcgtatctcttctcttat
catgatcgtctcatcaatacccttgcatgcgtcgttgctctaagatcatggaatctcttt
cctcatcaatgcaacaaaggaatcacgtttttccgggaaaatattgggaagctagaagac
gaaaatgatgagcatatgccaatcggattcgaagtagcattcccatcgttgcttgagata
gctcgaggaataaacattgatgtaccgtacgattctccggtcttaaaagatatatacgcc
aagaaagagctaaagcttacaaggataccaaaagagataatgcacaagataccaacaaca
ttgttgcatagtttggaggggatgcgtgatttagattgggaaaagctcttgaaacttcaa
tctcaagacggatctttcctcttctctccttcctctaccgcttttgcattcatgcagacc
cgagacagtaactgcctcgagtatttgcgaaatgccgtcaaacgtttcaatggaggagtt
cccaatgtctttcccgtggatcttttcgagcacatatggatagtggatcggttacaacgt
ttagggatatcgagatactttgaagaagagattaaagagtgtcttgactatgtccacaga
tattggaccgacaatggcatatgttgggctagatgttcccatgtccaagacatcgatgat
acagccatggcatttaggctcttaagacaacatggataccaagtgtccgcagatgtattc
aagaactttgagaaagagggagagtttttctgctttgtggggcaatcaaaccaagcagta
accggtatgttcaacctataccgggcatcacaattggcgtttccaagggaagagatattg
aaaaacgccaaagagttttcttataattatctgctagaaaaacgggagagagaggagttg
attgataagtggattataatgaaagacttacctggcgagattgggtttgcgttagagatt
ccatggtacgcaagcttgcctcgagtagagacgagattctatattgatcaatatggtgga
gaaaacgacgtttggattggcaagactctttataggatgccatacgtgaacaataatgga
tatctggaattagcaaaacaagattacaacaattgccaagctcagcatcagctcgaatgg
gacatattccaaaagtggtatgaagaaaataggttaagtgagtggggtgtgcgcagaagt
gagcttctcgagtgttactacttagcggctgcaactatatttgaatcagaaaggtcacat
gagagaatggtttgggctaagtcaagtgtattggttaaagccatttcttcttcttttggg
gaatcctctgactccagaagaagcttctccgatcagtttcatgaatacattgccaatgct
cgacgaagtgatcatcactttaatgacaggaacatgagattggaccgaccaggatcggtt
caggccagtcggcttgccggagtgttaatcgggactttgaatcaaatgtcttttgacctt
ttcatgtctcatggccgtgacgttaacaatctcctctatctatcgtggggagattggatg
gaaaaatggaaactatatggagatgaaggagaaggagagctcatggtgaagatgataatt
ctaatgaagaacaatgacctaactaacttcttcacccacactcacttcgttcgtctcgcg
gaaatcatcaatcgaatctgtcttcctcgccaatacttaaaggcaaggagaaacgatgag
aaggagaagacaataaagagtatggagaaggagatggggaaaatggttgagttagcattg
tcggagagtgacacatttcgtgacgtcagcatcacgtttcttgatgtagcaaaagcattt
tactactttgctttatgtggcgatcatctccaaactcacatctccaaagtcttgtttcaa
aaagtctag
DBGET
integrated database retrieval system
