Arabidopsis thaliana (thale cress): AT4G35800 Help Entry AT4G35800         CDS       T00041                                  Symbol NRPB1 Name (RefSeq) RNA polymerase II large subunit   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism ath  Arabidopsis thaliana (thale cress) Pathway ath03020   RNA polymerase ath03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ath00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     AT4G35800 (NRPB1)   09124 Replication and repair    03420 Nucleotide excision repair     AT4G35800 (NRPB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ath03021]     AT4G35800 (NRPB1)    03400 DNA repair and recombination proteins [BR:ath03400]     AT4G35800 (NRPB1) Enzymes [BR:ath01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      AT4G35800 (NRPB1) Transcription machinery [BR:ath03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      AT4G35800 (NRPB1) DNA repair and recombination proteins [BR:ath03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       AT4G35800 (NRPB1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  829734 NCBI-ProteinID:  NP_001329346 TAIR:  AT4G35800 UniProt:  P18616 A0A178UYS0 LinkDB All DBs Position 4:complement(16960558..16968128) Genome browser AA seq 1839 aa AA seqDB search MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDTRLGTI DRKVKCETCMANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHK FKQAMKIKNPKNRLKKILDACKNKTKCDGGDDIDDVQSHSTDEPVKKSRGGCGAQQPKLT IEGMKMIAEYKIQRKKNDEPDQLPEPAERKQTLGADRVLSVLKRISDADCQLLGFNPKFA RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYII RDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPYS TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD TLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI NLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSNGSLVHVIWEEVGPDA ARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINETISNAKTAVKDLIRQFQGKE LDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLAETNNLKAMVTAGSKGSFINISQM TACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ KLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIRELRDVFDAEYSKLETDRF QLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLLVV PGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAP GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL TPEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDFEFVRSYYEMPDED VSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAQKLILRIRI MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQVRKSRFDEEGGFK TSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFD GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAAYAETD CLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGT PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSP TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT SPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYS PSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY SPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP NT seq 5520 nt NT seq  +upstreamnt  +downstreamnt atggatacgaggtttccgttctctccggccgaggtctctaaagtccgggtggtccagttt ggcatactcagccccgatgagatcaggcaaatgtctgttatacatgttgagcatagtgag acgaccgagaagggtaaacctaaggtgggaggattgagtgatacccgtcttggtacgatt gatcggaaggtgaagtgtgagacatgtatggctaatatggctgagtgtccgggacatttt ggctatcttgagctcgctaagccaatgtatcatgtcggttttatgaagacagtgttaagt atcatgagatgtgtctgtttcaattgctccaagattttagctgatgaggaggagcataag tttaagcaggctatgaagatcaagaatcctaagaataggcttaagaagattctggatgcc tgcaaaaacaagaccaaatgtgatggtggtgatgacattgacgatgtccaaagccacagc acggatgaaccagtaaaaaagagccgaggtggatgtggtgcacaacaaccaaaactgact attgagggtatgaagatgattgcagaatacaaaattcaaaggaagaaaaatgatgagcca gatcagcttcccgagcctgcagaaaggaaacagacacttggtgctgatagggttttgagt gttttgaaaaggattagtgacgcggattgtcaactcctaggtttcaaccctaagtttgct cgtcctgactggatgattcttgaagtccttcctattcctccaccccctgtcagaccatct gtaatgatggacgccacttccaggagtgaggatgacttgacccatcagctagctatgatt attcgacacaatgaaaacttgaaaaggcaggaaaaaaatggagcgccagctcatattata tcagagtttacacaactcttgcagtttcatatagctacgtattttgataacgagttgcct ggacagccaagggctactcagaaatcagggaggcctattaaatcaatatgtagtaggctg aaggcaaaggaaggcagaatcaggggtaacttgatgggaaaacgtgttgatttctcggca cgtactgttattactccagatccaacaataaatattgatgaacttggtgttccgtggagt attgctctgaatctcacatacccagaaacagttactccctataacattgaaagattaaag gagcttgttgattatggaccacatcctccacctgggaagactggagcgaaatatatcata agagatgatggccaaagactagatcttcggtatcttaagaagagcagtgatcaacatttg gaacttggatacaaggtggagcggcatttacaggatggtgattttgttctgtttaatcgt caaccaagtctgcacaaaatgtctatcatgggtcacaggattaggattatgccatattcc actttccgtctgaatttgtctgtcacgtctccgtacaatgctgattttgatggggatgag atgaacatgcatgtaccacaatcattcgagaccagagccgaggtgttagagctgatgatg gttcctaaatgtattgtctccccccaggcgaatcgtcctgtgatgggaattgtgcaggat accctcttggggtgccgtaaaattacaaagagagatactttcatagagaaggatgtattc atgaacacactgatgtggtgggaagacttcgatgggaaagttccggctcctgcaatcttg aagcctcgtcctctttggactggcaaacaagtttttaatcttatcataccaaaacagata aatctgttgaggtactctgcttggcacgcagatacagagactggatttataactccgggg gatactcaagtgcgaattgaaagaggggaacttcttgccggaactctttgcaaaaagacc cttggtacatctaatggaagtctcgtgcatgtcatttgggaagaggttggtcctgatgca gctagaaaattcctcggtcatactcaatggcttgtcaattactggcttctgcagaatggt tttaccatcggaattggtgacacaattgccgattcatcaacaatggagaaaattaatgaa actatttccaatgcaaaaactgctgtgaaagatcttatccggcagttccagggaaaggaa ttggaccctgagcctggccgaactatgagagatacatttgagaacagggttaaccaggtt ttgaataaagctcgtgatgatgctggaagtagtgctcaaaagagtttagcagaaaccaat aaccttaaggccatggtgacagcaggatccaaaggaagtttcatcaatatttctcaaatg acagcgtgtgtcggtcagcaaaatgttgaagggaagcgaattccatttggatttgatggg cggacattgccacatttcaccaaagatgattatggtcctgaaagtcgtggttttgttgag aattcgtacctgcgtggcttgactcctcaagagttctttttccatgctatgggaggacga gaaggtcttattgatactgctgtgaagacatcagaaactggatacattcagaggcgattg gtaaaggctatggaggatattatggttaagtatgatgggacagtcagaaactctttgggt gatgttattcaatttctctatggagaagatggtatggatgctgtatggatagaatcacag aagctggattccttgaaaatgaagaaatcagagtttgataggacttttaagtatgagatt gacgacgaaaactggaatcctacttacctaagtgatgaacatcttgaagacttgaagggg attcgggagttgcgtgatgtattcgatgcggaatattcgaaacttgagactgacagattc caactcgggacagaaattgcaacaaatggtgatagcacttggccattgcctgttaacatc aagaggcatatctggaatgcgcagaagactttcaaaattgacttgcgcaaaatttcagat atgcaccctgttgaaattgttgatgctgttgataaactacaggagaggctgttggttgtt cctggtgatgatgcgttgagtgtggaagcacagaaaaacgcaacattgttctttaacatt ttgcttcgcagcactcttgctagtaaaagagtgttggaagaatacaagctcagccgcgag gcttttgagtgggtcattggtgagattgaatcaaggtttttacaatcgctagtggcccca ggggaaatgatcggttgtgttgctgctcaatcaattggagaacctgctacgcagatgact ctgaataccttccattatgctggtgtcagtgcaaagaacgttacgctcggagttcccagg ttgcgtgaaattattaatgtagctaagaggatcaaaacaccatccctatcagtctatctc actccggaagctagcaaatcaaaagagggggctaagactgttcagtgtgctttggagtat actactctcaggagtgttactcaagctacggaagtctggtatgacccagatccaatgagt acaataattgaagaggactttgaatttgtgaggtcctactatgaaatgccagatgaagat gtttccccagataagatatctccgtggctacttcgtatagagttgaatcgcgagatgatg gttgataagaaattgagtatggcggatattgcggagaagatcaaccttgagttcgatgat gacctaacttgcatattcaatgatgataatgctcaaaaactgatccttcgaattcgcatt atgaacgatgagggcccaaagggagagttgcaagatgaatcggctgaagatgatgttttc ctcaaaaagattgagagcaacatgctgacagaaatggcactcagaggtattccagacatc aacaaggtttttataaaacaggttagaaagagcaggtttgatgaggagggaggcttcaag acatctgaggagtggatgttggatacagaaggtgtgaacctcttagctgtcatgtgtcac gaagatgtggatccaaagaggacaacaagcaatcacttgattgaaattattgaagttctc ggaattgaggcagttcgtcgtgctttgcttgatgaactccgtgttgtgatatcctttgat ggttcttatgtgaattaccgtcatcttgccatcttgtgtgatactatgacctatcgcggt catctgatggctatcactcgacacggtatcaatagaaatgacactgggcctctgatgaga tgctcttttgaagaaacagttgatattctgctagatgctgcggcttatgctgagacagac tgcttacggggtgttactgagaatataatgttgggtcaacttgcaccaattgggacagga gattgtgagttgtatctgaatgatgagatgctgaagaatgcaattgaacttcagctccct agctatatggatggtcttgaatttggaatgactcctgctcgttcaccagtgtcaggcact ccttaccatgaaggcatgatgtctccaaactacctgttaagtccaaatatgcgtttatcc ccaatgtcagatgcacagttttctccatatgttggtggaatggccttttcgccttcttct tctccaggatatagtccatcatcgcctggatacagtcctacttctcccggttacagtcca acttcgcctggatatagcccgacttctcccggttacagtccaacttcgcctacctacagt cccagttctcctggctatagcccaacaagccctgcttattctcctacaagtccttcctat tctcctacctctccgagctacagcccaacgtctccaagctatagcccaacgtcgccaagc tacagcccgacatctccgagctacagtcctacttccccaagttacagcccgacttcgcct gcttacagcccgacttcacctgcttacagcccaacttcaccagcatacagcccaacctct ccttcttacagcccaacttcaccttcttacagcccaacatcgccttcttacagccctact tcaccatcttacagcccaacatctccgtcttacagccctacttcacccgcatatagcccc acatctcctggctacagccctacttcaccaagttacagtccaacatcaccaagctacggt cctacgtctccaagctacaaccctcagtctgctaaatatagcccatctatagcttactct cctagcaatgcaagactatcaccagctagcccctacagtcctacatctcccaactacagc ccgacatctccatcatactcacccacatctccatcttattcaccttcaagtccaacatac agtcccagcagcccatacagctcaggagcaagcccagactacagcccaagcgcaggctac tcgccaacacttcccggttattcaccgtcatcaacgggtcagtataccccacatgagggc gataaaaaggacaagactggaaaaaaagatgccagtaaggatgataaaggcaacccttga

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