Arabidopsis thaliana (thale cress): AT4G39850
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Entry
AT4G39850 CDS
T00041
Symbol
ABCD1
Name
(RefSeq) peroxisomal ABC transporter 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath02010
ABC transporters
ath04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AT4G39850 (ABCD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AT4G39850 (ABCD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ath02000
]
AT4G39850 (ABCD1)
Enzymes [BR:
ath01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
AT4G39850 (ABCD1)
Transporters [BR:
ath02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
AT4G39850 (ABCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
SMC_N
DEAD
AAA_22
nSTAND1
AAA_30
T2SSE
Motif
Other DBs
NCBI-GeneID:
830144
NCBI-ProteinID:
NP_001328232
TAIR:
AT4G39850
UniProt:
Q94FB9
LinkDB
All DBs
Position
4:18488434..18497266
Genome browser
AA seq
1337 aa
AA seq
DB search
MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSD
DDETLEKLTATDQNAKITTKKKKGGGLKSLQVLTAILLSQMGKMGARDLLALVATVVFRT
ALSNRLAKVQGFLFRAAFLRRAPLFLRLISENIMLCFMLSTLHSTSKYITGALSLRFRKI
LTKIIHSHYFENMVYYKISHVDGRITHPEQRIASDVPRFSSELSDLILDDLTAVTDGILY
AWRLCSYASPKYIFWILAYVLGAGTAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSE
SIAFYGGETREESHIQQKFKNLVSHMSHVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF
FSGHLRPDDSTLGRAEMLSNIRYHTSVIISLFQALGTLSISSRRLNRLSGYADRIHELMA
VSRELSGDDKSSFQRNRSRNYLSEANYVEFSDVKVVTPTGNVLVEDLTLRVEQGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIYPL
TSGQESELLTEIGMVELLKNVDLEYLLDRYQPEKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHY
KRDDSALLTDAEIDSVKSSDTDRQNDAMVVQRAFAAARKESATNSKAQSYQTQLIARSPV
VDKSVVLPRFPQPQTSQRALPSRVAAMLNVLIPTIFDKQGAQLLAVACLVVSRTLISDRI
ASLNGTTVKYVLEQDKAAFVRLIGLSVLQSGASSIIAPSLRHLTQRLALGWRIRLTQHLL
RNYLRNNAFYKVFHMSGNSIDADQRLTRDLEKLTADLSGLLTGMVKPSVDILWFTWRMKL
LTGQRGVAILYTYMLLGLGFLRRVAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIAFFG
GGAREKAMVDKKFRALLDHSLMLLRKKWLYGILDDFVTKQLPNNVTWGLSLLYALEHKGD
RALVSTQGELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLDASQS
GVTSENQTSRLDSQDLLSFSEVDIITPAQKLMASKLSCEIVSGKSLLVTGPNGSGKTSVF
RVLRDIWPTVCGRLTKPSLDIKELGSGNGMFFVPQRPYTCLGTLRDQIIYPLSKEEAEKR
AAKLYTSGESSTEAGSILDSHLKTILENVRLVYLLERDVGGWDATTNWEDILSLGEQQRL
GMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLELRL
IDGEGNWELRSIEQTTE
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacttcaactattgcagttaactgagcggggtcggggtcttgtagcgtcaaga
cggaaatctatactgcttgcggctgggattgtagctgctggtggaactgctgtttacctg
aaatcaagggtcgcttcccggaggcctgattcttcgcgtctttgcaatggtcagagtgat
gatgatgagactttggaaaagctgactgcaactgatcaaaatgcaaagataaccacgaaa
aagaagaaaggaggaggattgaagtctcttcaggttctgactgctattcttctctctcag
atgggaaaaatgggtgccagggatcttttggcactagtcgccaccgtggttttcagaaca
gctttgagcaatagattggcaaaagtgcaaggtttccttttccgtgctgctttcttaagg
cgtgcgccactgtttctacggctcatctccgagaatattatgttgtgtttcatgctatca
acattgcactctacttcaaagtacataactggggcattgagtttgcgattcagaaagata
ttgaccaagattatccattcacactattttgagaatatggtatattacaaaatatcacac
gtggatggtcggattacgcaccctgaacaaagaattgccagcgatgtaccaagattctcc
tcagagttgagcgatcttatactggatgatttgacggcggttactgatggaattttgtat
gcatggcgcctgtgttcatatgctagtccaaaatacatcttctggatactggcctatgta
ctgggggctgggacggcgataagaaacttttctccttcttttgggaaattgatgtccaag
gaacagcagttagaaggagagtaccggcaacttcattcacgcttaaggactcattcggaa
agcatagcattctatggtggggaaaccagggaagaatctcatatacaacaaaagttcaag
aatcttgttagccatatgagtcacgtgcttcatgatcactggtggtttggtatgatccaa
gattttctgctgaagtatcttggggccacagttgcagttattctgattatcgaaccattc
ttctctgggcatctaagacctgacgactcgaccttaggaagagctgagatgcttagcaat
ataagatatcacactagtgtcattatatctctctttcaggcgttgggaacactttctata
agttccaggcggctcaaccgactcagtggttatgctgaccgaatccatgagttgatggct
gtctcaagagaactcagtggtgatgataaatcgtctttccagagaaatagaagcagaaat
tatctaagtgaagctaattatgtagagttttccgatgtcaaggttgttactccaaccgga
aatgttttggtggaggatctcacccttcgagttgagcaagggtctaatcttctgattaca
ggtcctaatggaagtggcaagagttcccttttccgagtattaggaggtctatggcccctg
gtgtctggacatattgtgaagccaggagttggttctgatcttaacaaggagatcttctat
gtgccgcaacggccttatatggcagtaggaacacttcgtgaccagttaatatatcctctt
acttctggccaagagagtgaactgctcactgagattggaatggtggagctattgaaaaat
gttgatctagaatatttattggatcgctaccaacctgaaaaagaggttaattggggtgat
gaattatctcttggagagcaacagagattgggtatggccagactattctaccacaaaccc
aaatttgcaattctagatgaatgcacaagtgctgtcacaactgatatggaagaacgcttt
gccgctaaggttcgagctatgggaacttcttgcataacaatctcccatcgtccagcgctt
gttgcattccatgatgttgttctgtcattagacggtgaaggaggatggagtgttcattac
aagagggatgactctgcccttctgacggatgctgaaattgattcagtgaaaagttcagat
acagatcggcaaaatgatgcgatggttgttcaacgagcgtttgctgcagctagaaaggaa
tctgctactaattcaaaggctcagtcgtaccagacacagttaattgcaagatcacctgtt
gtagataaaagtgtagtgttgcctcgttttcctcaacctcaaacatcccaaagggcttta
ccatcaagagtagctgcaatgttaaacgtgttgatacccactatatttgacaagcaagga
gctcaactgcttgctgttgcttgccttgtcgtctcaagaacgctgatctctgaccgaata
gcctctttgaatgggaccactgtgaagtatgtcttggagcaagataaggcagcctttgtt
cgtttgattggtttgagtgttctccaaagtggtgcatcttctataattgctccttcacta
aggcatttaacgcaaaggctagcgttagggtggaggattcgtttgactcaacatctgcta
aggaactatttgagaaataatgcgttttacaaggttttccacatgtcaggcaatagtatt
gatgcggaccagagactcactcgtgacctggaaaagttaaccgctgacttgtctggactt
cttactggaatggtaaagccatcggttgacattctctggttcacctggaggatgaagtta
ctgactggtcagaggggagttgccatactttacacatatatgttacttggtcttggtttt
ctgagacgtgttgctcccgatttcggtgatctagccggtgaagaacagcagcttgaaggg
aagtttcggtttatgcacgagaggctgaacactcatgctgaatctattgcattctttgga
ggtggagctcgagaaaaggctatggttgacaaaaaattcagggccctactggatcattct
ctcatgctcttgaggaagaaatggttgtatggcatacttgatgattttgtgacaaagcaa
cttcccaataatgtgacgtggggattgagtttattgtatgccctagaacacaagggagac
agagcacttgtctccactcaaggtgaattggcacatgcattgcggtatctagcttctgtt
gtctcccaaagctttatggcttttggcgatattcttgaactacacaagaagttcctggag
ctctctggtggtattaacagaatttttgagctcgatgagtttttggatgcttctcagtca
ggtgttacctcagaaaatcaaacaagtcgtttggattctcaagatctactttccttttcg
gaggtggatatcattacccctgctcagaaattgatggctagcaagttgtcgtgtgaaata
gtttcagggaaaagcctgctcgtcacaggtccaaatggtagtggaaagacttcagtattt
agagtccttagagatatctggcccactgtatgtggaagacttaccaaaccatcattggat
atcaaagaacttgggtcagggaatggcatgttttttgtcccgcagcgaccttatacatgt
ttagggacactgagagatcaaattatataccctctatctaaagaagaagcagagaaaagg
gcagcaaagttgtacaccagtggagagagctcaacagaagctggaagcattctggattct
catttgaaaaccattctggagaatgttcggttagtttatctcttggaaagagacgtaggt
ggttgggatgctactaccaattgggaagacatattatctcttggagagcaacagagatta
ggcatggcacgtttattctttcacaggccgaagtttggagtccttgatgaatgcacaaat
gcgacgagtgttgatgttgaggaacagctctatagagttgcacgagacatgggagtcact
ttcataacctcatcacaacggccggctctgatcccattccattccttggagctaaggctg
attgatggagaaggaaactgggagctccgttcgatcgaacagacaacagagtga
DBGET
integrated database retrieval system
