Arabidopsis thaliana (thale cress): AT5G60040
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Entry
AT5G60040 CDS
T00041
Symbol
NRPC1
Name
(RefSeq) nuclear RNA polymerase C1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT5G60040 (NRPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G60040 (NRPC1)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT5G60040 (NRPC1)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
AT5G60040 (NRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
836126
NCBI-ProteinID:
NP_200812
TAIR:
AT5G60040
UniProt:
F4JXF9
A0A5S9YGT2
LinkDB
All DBs
Position
5:24173259..24183641
Genome browser
AA seq
1376 aa
AA seq
DB search
METKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENG
LLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSN
MLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKI
AAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKD
CELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKILS
QPTSSPKNMQVWDTVQIEVARYINSEVRGCQNQPEEHPLSGILQRLKGKGGRFRANLSGK
RVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGAR
NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARI
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA
STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSV
LLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGN
KDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQF
GYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLI
MSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFY
SGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQ
FTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRHD
KSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFRYREKKIEA
GTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAEL
ENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSITPWSV
KNSILKTPRIKLNDNDIRVLDTGLDITPVVDKSRAHFNLHNLKNVLPNIIVNGIKTVERV
VVAEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAART
TIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTG
DHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagatggaaattgaattcactaagaagccctacatcgaagatgttggtcct
cttaaaataaaaagcataaacttctctgtgctttctgatcttgaggtcatgaaagccgct
gaagttcaagtctggaacatcggtttatacgaccacagttttaaaccctatgaaaacggc
ttgttggatcctcgaatgggtcctccaaacaaaaagtctatatgcacaacctgtgaagga
aacttccaaaattgtccgggacactatggatatctgaagcttgacctcccagtttacaac
gttggatactttaattttatccttgatattttgaagtgcatttgtaagcgctgttccaac
atgcttttagatgagaaattgtatgaagatcacttgaggaagatgcggaatcccagaatg
gagccattgaagaagacagaattggcaaaagccgttgtcaagaagtgcagtacgatggcg
agccagagaattataacgtgcaaaaaatgtggctacctgaatgggatggtaaaaaagatt
gcagcgcagtttggtataggcatcagtcatgaccgatctaaaatccatggtggagagatt
gatgaatgtaaatctgcaatatcccacacaaagcagtctactgcagcaataaatcctctt
acctatgttcttgatcctaacttggtgctcgggctttttaaaagaatgagtgacaaggac
tgcgaacttctttatattgcctatagacctgagaatcttatcataacgtgcatgcttgtg
ccacctttatccatccgaccgtctgttatgattggtggtattcaaagcaatgaaaacgac
ttaacagcgcgattaaagcaaatcattctaggcaatgcttctcttcataaaattttaagt
caacctacctcatcccccaaaaacatgcaagtatgggatacagttcaaatcgaggttgca
agatacattaacagtgaagtccgtggttgtcaaaaccagccagaagagcatccactgtct
ggaattcttcagcgtctcaaaggaaaagggggacgtttccgtgcaaacttgtcggggaag
cgtgtcgagttcactggtagaactgtaatttcacctgatcccaatctgaaaattacagag
gtaggaattccaatccttatggctcagatcctaacttttcctgaatgtgtttctcgtcat
aatattgagaagttgaggcaatgtgtccgtaatggccctaataaataccctggtgccaga
aatgtcagatatccagatggttcttcaaggactttggttggtgattatcgcaagcgtatt
gctgatgaactggccattggctgcatagttgaccgccatttgcaagaaggagatgttgtt
ctttttaacaggcaaccgagtctgcatcggatgtctatcatgtgtcacagggcaagaata
atgccttggagaacgttgaggttcaacgaatcggtttgtaacccatataatgctgatttt
gatggtgatgagatgaacatgcacgtaccacaaacagaggaggctcggacagaggctatt
acattgatgggggtacaaaacaatttatgcaccccaaaaaatggagaaattttagtagca
tcaacgcaggactttttgacatcttcttttttgataacgagaaaggacacattttatgac
cgtgcagccttttcacttatatgttcttacatgggagatgggatggattccatagatttg
ccaacacccacaatccttaagccaatagagctttggactggtaaacagatctttagtgtt
ttgctgcgtccaaatgcaagtattagagtctacgtaactcttaatgtgaaagagaagaac
ttcaagaagggagagcatggtttcgatgaaacaatgtgcataaatgatggatgggtttat
tttcgaaacagtgagctaatatcaggacagttggggaaggctacgttaggaaatggaaac
aaggatggattatattctattcttctaagagattacaactcccatgctgctgcagtctgc
atgaatcggctagcaaaattgagtgctcggtggattggtatccatggcttctctattgga
attgatgacgttcaacctggtgaagagttgagtaaggaaagaaaagacagcatccagttt
ggatatgaccagtgccatcgcaaaattgaggaatttaatagaggaaatttgcaacttaaa
gctggtctagatggtgcaaaatccttagaagctgaaataacagggattctcaatacaatt
cgagaagccactgggaaggcctgtatgagcggattacattggagaaatagtcccttgatc
atgtcacaatgtggttccaaaggatctcctatcaatatcagtcagatggtcgcatgtgtt
ggtcagcagacagttaatggtcaccgtgctcctgatggatttatagatcgaagtcttcct
catttccctaggatgtccaaatcacctgcagcgaaaggttttgttgctaattcgttctac
agtggtcttactgccacagaatttttctttcacactatgggtggacgagaaggtctagtt
gatacagcggtgaaaactgcaagtacaggttacatgtctcgtagactgatgaaagccttg
gaggatctattagtccattatgataacacagtgagaaatgccagcggatgtatacttcaa
tttacttatggggatgatggaatggacccagcactaatggaaggaaaggatggagctcct
ttaaattttaatagattatttctgaaagttcaggccacatgtcctcctcgatctcaccac
acatatctttcttcagaagaattgtcgcaaaagtttgaagaggaattagtcagacatgat
aaaagtcgggtttgcactgatgcctttgtgaaatctcttcgagaatttgtttccttgctc
ggagtgaagtctgcaagcccgccccaggttttatataaagcatctggtgtgactgataag
caactcgaggtatttgtaaaaatttgtgtatttcgctaccgggaaaaaaaaattgaggct
gggactgcaattgggacaataggagctcagagtattggagaacctgggacacaaatgact
ttgaaaacttttcactttgctggagttgcgagcatgaatatcacacaaggagtcccccga
atcaatgaaatcatcaatgcttccaaaaatataagcacgcctgtcatctctgcagaactt
gagaaccccctggaattgactagtgcacgatgggtgaaaggacgcattgagaaaactact
ttaggacaggttgctgagagtatcgaggtgctaatgacttcaacatcagcgtcagtgagg
ataattcttgacaataaaataatcgaggaggcatgtttatctataaccccctggtcggta
aaaaattccatcctaaagacccccagaatcaaactcaacgataatgatattagggtttta
gatacgggtttggatattactcccgtggtggataaaagtagggctcatttcaatctccac
aatctgaagaatgtgctgccaaatattatagtgaatgggatcaaaacagttgagcgagtt
gttgtcgcagaggatatggataaaagtaaacagatagatgggaagacaaagtggaaactg
tttgtggagggcacaaacctcctggcagttatggggacaccgggaatcaatgggagaact
actacaagtaacaatgttgtcgaagtaagcaaaacacttggaatcgaggctgcaaggaca
acgattattgatgaaatagggacagttatgggaaaccatggtatgagtatagacatccgt
cacatgatgcttttggctgatgtcatgacttacaggggggaggttctcggaatacaaaga
accgggattcagaagatggataaaagtgttctgatgcaggcatcttttgagaggactgga
gatcatttatttagtgcagcagctagcggaaaagttgataacatagagggagttacagaa
tgtgtgattatgggcataccaatgaagctcggaaccgggatactcaaagtccttcaaagg
accgatgatttgcccaagttgaaatatggacctgatccaatcatctcttga
DBGET
integrated database retrieval system