Arabidopsis thaliana (thale cress): AT5G60600
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Entry
AT5G60600 CDS
T00041
Symbol
HDS
Name
(RefSeq) 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00900
Terpenoid backbone biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AT5G60600 (HDS)
Enzymes [BR:
ath01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
AT5G60600 (HDS)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
AT5G60600 (HDS)
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Gene cluster
GFIT
Motif
Pfam:
GcpE
Sgf11
zf-RING_7
Motif
Other DBs
NCBI-GeneID:
836181
NCBI-ProteinID:
NP_851233
TAIR:
AT5G60600
UniProt:
F4K0E8
A0A178UN53
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Position
5:24358885..24363485
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AA seq
741 aa
AA seq
DB search
MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQ
PASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTV
DEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAEC
FDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY
VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISL
DQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGVI
APLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATM
ILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGL
LVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEAT
DALIGLIKEHGRWVDPPVADE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggagtattgccagctccggtttctgggatcaagataccggattcgaaagtc
gggtttggtaaaagcatgaatcttgtgagaatttgtgatgttaggagtctaagatctgct
aggagaagagtttcggttatccggaattcaaaccaaggctctgatttagctgagcttcaa
cctgcatccgaaggaagccctctcttagtgccaagacagaaatattgtgaatcattgcat
aagacggtgagaaggaagactcgtactgttatggttggaaatgtcgcccttggaagcgaa
catccgataaggattcaaacgatgactacttcggatacaaaagatattactggaactgtt
gatgaggttatgagaatagcggataaaggagctgatattgtaaggataactgttcaaggg
aagaaagaggcggatgcgtgctttgaaataaaagataaactcgttcagcttaattacaat
ataccgctggttgcagatattcattttgcccctactgtagccttacgagtcgctgaatgc
tttgacaagatccgtgtcaacccaggaaattttgcggacaggcgggcccagtttgagacg
atagattatacagaagatgaatatcagaaagaactccagcatatcgagcaggtcttcact
cctttggttgagaaatgcaaaaagtacgggagagcaatgcgtattgggacaaatcatgga
agtctttctgaccgtatcatgagctattacggggattctccccgaggaatggttgaatct
gcgtttgagtttgcaagaatatgtcggaaattagactatcacaactttgttttctcaatg
aaagcgagcaacccagtgatcatggtccaggcgtaccgtttacttgtggctgagatgtat
gttcatggatgggattatcctttgcatttgggagttactgaggcaggagaaggcgaagat
ggacggatgaaatctgcgattggaattgggacgcttcttcaggacgggctcggtgacaca
ataagagtttcactgacggagccaccagaagaggagatagatccctgcaggcgattggct
aacctcgggacaaaagctgccaaacttcaacaaggcgttgcaccgtttgaagaaaagcat
aggcattactttgattttcagcgtcggacgggtgatctacctgtacaaaaagagggagaa
gaggttgattacagaaatgtccttcaccgtgatggttctgttctgatgtcgatttctctg
gatcaactaaaggcacctgaactcctctacagatcactcgctacaaagcttgtcgtgggt
atgccattcaaggatctggcaactgttgattcaatcttattaagagagctaccgcctgta
gatgatcaagtggctcgtttggctctaaaacggttgattgatgtcagtatgggagttata
gcacctttatcagagcaactaacaaagccattgcccaatgccatggttcttgtcaacctc
aaggaactatctggtggcgcttacaagcttctccctgaaggtacacgcttggttgtctct
ctacgaggcgatgagccttacgaggagcttgaaatactcaaaaacattgatgctactatg
attctccatgatgtacctttcactgaagacaaagttagcagagtacatgcagctcggagg
ctattcgagttcttatccgagaattcagttaactttcctgttattcatcacataaacttc
ccaaccggaatccacagagacgaattggtgattcatgcagggacatatgctggaggcctt
cttgtggatggactaggtgatggcgtaatgctcgaagcacctgaccaagattttgatttt
cttaggaatacttccttcaacttattacaaggatgcagaatgcgtaacactaagacggaa
tatgtatcgtgcccgtcttgtggaagaacgcttttcgacttgcaagaaatcagcgccgag
atccgagaaaagacttcccatttacctggcgtttcgatcgcaatcatgggatgcattgtg
aatggaccaggagaaatggcagatgctgatttcggatatgtaggtggttctcccggaaaa
atcgacctttatgtcggaaagacggtggtgaagcgtgggatagctatgacggaggcaaca
gatgctctgatcggtctgatcaaagaacatggtcgttgggtcgacccgcccgtggctgat
gagtag
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