Aliarcobacter trophiarum: ATR_1398
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Entry
ATR_1398 CDS
T06356
Symbol
ispA
Name
(GenBank) geranyl diphosphate synthase / farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
atp
Aliarcobacter trophiarum
Pathway
atp00900
Terpenoid backbone biosynthesis
atp01100
Metabolic pathways
atp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ATR_1398 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atp01006
]
ATR_1398 (ispA)
Enzymes [BR:
atp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ATR_1398 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ATR_1398 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
ATR_1398 (ispA)
Prenyltransferases [BR:
atp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ATR_1398 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
YflT
Q_salvage
Motif
Other DBs
NCBI-ProteinID:
AXK49255
UniProt:
A0A4V1LXJ0
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All DBs
Position
complement(1346668..1347540)
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AA seq
290 aa
AA seq
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MKELLGEFEEFLLKNLPKIDSFHPHFEAAMQDMLIAGGKRFRPMLLLSIVKAKKPLLLEN
SLKVALAIEFLHTYSLIHDDLPAMDNASLRRGFPTLHIKYDEVTAILVGDALNSESFNLI
ATASLHNDIKIELIKLLGHNGGLNGMVIGQAIDCHFEKQKLELEKLEFLHLNKTAKLIAA
SLKMGAIIASCGEKIEEELYSFGLDLGLLFQIQDDIIDELESSEEAGKTTQNDSFKNSFV
NLLGLEEAKKSADDLAQKCLERLEVFDDELKDSLKDLLVSYINRHKKYNS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcttttaggagagtttgaagaatttttgctaaaaaatcttccaaaaatagat
agttttcatccacattttgaagctgctatgcaagatatgttgatagcaggtggtaaaaga
tttcgtccaatgctacttttaagtatcgtaaaggcaaaaaaacctttgcttttagaaaac
tcattaaaagttgctttggcaatagagtttttgcatacatactctttaattcatgatgat
ttacctgccatggataatgcaagtttgagaagaggatttccaacacttcatataaaatat
gatgaagtaacagctattttagtaggggatgctttaaatagtgaaagttttaatctaata
gcaactgcaagtttacataatgatataaaaatagagctaataaaacttttggggcataat
ggcggattaaatggtatggtaattggtcaagcaatagattgccactttgaaaaacaaaaa
ttagagttagaaaagttggagtttttgcacttaaataaaacagcaaagttaattgctgca
agtcttaaaatgggtgcaattatcgcttcatgtggtgaaaaaatagaagaagagctttat
agttttggtttagatttgggacttttgtttcaaatccaagatgatattattgatgaactt
gaaagtagtgaagaagctggaaaaacgacacaaaatgacagctttaaaaactcttttgta
aatcttttaggtttagaagaagcgaaaaaaagtgcagatgatttggcacaaaaatgttta
gagagactagaagtctttgatgatgagttaaaagatagtttaaaagatttattagtaagc
tatataaataggcataaaaaatacaactcttag
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