Amborella trichopoda: 18423259
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Entry
18423259 CDS
T02990
Name
(RefSeq) isoamylase 3, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
atr
Amborella trichopoda
Pathway
atr00500
Starch and sucrose metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18423259
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
18423259
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Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
18423259
NCBI-ProteinID:
XP_006827924
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAQSCLTNLKARVLFETCSPPHVTSLSSVAVFGSRKMGSKLCCTRSFSPRDKIRNVTRQT
EKIGRGSPNVYGQQAQESMIENEMTEVLEISPTLKSSPGKPSPLGVSETENGINFAIFSQ
HASSVTLSLSLPEGYFEQLEQDTVIVEINLDPHVNKSGDIWHICVEDLPRYGVLYGYRVG
GPHGWQQGHRFDSNIILLDPYAKLVEGRRVFADSSNKMSKFLGTYDFNCLPFDWGSDYKL
PNIPEKDLVIYEMNVRAFTADVSSELDPNLRGSYLGVIEKIPHLLELGINAVELLPVFEF
DEFELQRHPNARDHMVNTWGYSTLNFFAPMSRYASSGRGPLAASIEFKQMVKALHAAGIE
VILDVVYNHTNEADDKIPYTTSFRGIDNKVYYMLDLNNSNQFLNFSGCGNTLNCNHPVVM
ELILDSLRHWVMEYHVDGFRFDLASVLCRGTDGSPLNAPPLVKGIAKDAVLSRCKIIAEP
WDCGGLYLVGRFPNWDRWAEWNGKYRDDVRRFIKGDYGTKGSFATRIAGSADLYQVNKRK
PYHSMNFIIAHDGFTLYDLVAYNFKHNDANGEGGQDGSNDNFSWNCGVEGETDDPELQSL
RSRQMKNFHLALMISQGTPMILMGDEYGHTRYGNNNSYGHDTSINHFQWGQLQEKRKDHF
RFFSEIIKFRRRNPLLGREKFLDKSDITWHENNWDNYNSKFLAFTLHDSKLRSDIYLAFN
AHNYFVNAVMPPPPLGRKWFRVIDTNLLSPDDFVQDGVTGIKDAYNVAPYSSILLEAKQS
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcttgtttaacgaatttaaaggccagggttctctttgagacttgctcacca
ccgcatgttacttctttgtcgtcagttgcggtctttggttcaaggaaaatggggtccaaa
ttgtgttgtactaggtcttttagcccaagagataaaattcgcaatgtgaccaggcaaact
gagaagattgggcgtgggagtccaaatgtttatggtcagcaggcccaagaaagcatgatt
gagaatgagatgactgaagttttagagatcagcccaactctgaaatcctctcctgggaaa
ccctctccacttggggtatcagaaactgaaaatggtataaatttcgcgattttctctcag
catgcgtcatctgtcactcttagcttgtcactgcctgaagggtactttgaacagttggaa
caagacactgtgatagtggagatcaacttggatccacatgtaaataagagtggagacata
tggcatatctgtgtggaggatttgccaagatatggtgttttatatggataccgtgttggg
ggcccccatggatggcagcaagggcaccgttttgactccaacatcattttgctggatcca
tatgcaaaactagttgaaggtcgtcgggtctttgccgactccagcaataagatgtccaaa
tttttgggtacatatgattttaattgcttgccctttgattggggttctgattacaagctt
cctaatatcccagagaaagatcttgttatttatgaaatgaacgttcgtgcatttactgct
gatgtatcaagtgaacttgatccaaatttacgtgggagctatcttggcgtcattgaaaag
attccacatcttctagagcttggcatcaacgcggtggaactattgcctgtttttgagttt
gatgagtttgaacttcagaggcatccaaacgctagagaccacatggtcaacacctggggt
tattctaccttaaatttctttgctcctatgagtcgttatgcgagcagtgggagagggcct
ctagcagcatctatagagttcaaacaaatggtcaaggctttgcatgctgcaggaattgag
gtaattttggatgtggtctataatcatacaaatgaagcagatgataagatcccctacact
acttccttccgtgggatagataataaagtttattacatgttggatcttaataactccaat
caatttctcaatttttcaggctgtgggaacaccttgaactgcaaccatccggttgtgatg
gaacttatacttgatagtttgaggcactgggttatggagtatcatgtagatggattcagg
tttgacctggcaagtgttctttgtcgtgggactgatggctctccattgaatgcacctcct
ctagtcaaggggattgctaaggatgctgtcttgtcacggtgcaaaattattgccgaacct
tgggattgtgggggtctttacctggtgggaagatttcctaattgggatcggtgggctgaa
tggaatggcaagtatcgtgatgatgttagaagattcataaagggtgactatggcacaaag
gggagttttgccactcgaatagcaggatctgcagacctataccaggtaaacaagcgcaag
ccataccacagcatgaattttatcattgcccatgatgggtttaccttgtatgatttggtt
gcttataattttaagcacaacgatgctaatggagaaggcggccaagatggaagtaatgat
aattttagttggaactgtggtgtcgaaggtgaaactgatgatcctgaactacagtcgcta
cgatcacgacaaatgaaaaacttccatttggcattgatgatctcacagggaacaccaatg
attttaatgggagatgaatacggccacacccgctatgggaacaacaacagttatgggcat
gatacatccatcaaccatttccaatggggacagctacaggagaagagaaaggatcacttc
aggtttttctccgaaataattaaattccgtagaaggaatcctcttttgggacgtgagaaa
tttcttgacaagagtgatattacttggcatgagaataactgggacaactacaacagcaaa
ttccttgccttcacgctccatgacagcaagcttcgcagcgacatctacttggctttcaac
gcacataactactttgtcaatgccgtgatgcccccacctcctcttggaagaaaatggttt
cgagtgatcgacaccaatcttctttctccagacgattttgttcaggatggtgttactggc
attaaagatgcttacaatgttgccccgtactcctccattcttcttgaagcaaaacagtcc
tcgtag
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