Amborella trichopoda: 18427080
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Entry
18427080 CDS
T02990
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
atr
Amborella trichopoda
Pathway
atr00061
Fatty acid biosynthesis
atr00620
Pyruvate metabolism
atr00640
Propanoate metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01200
Carbon metabolism
atr01212
Fatty acid metabolism
Module
atr_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
18427080
00640 Propanoate metabolism
18427080
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18427080
Enzymes [BR:
atr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
18427080
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
18427080
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
18427080
NCBI-ProteinID:
XP_011620702
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All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MDALIQCRSFCSPSDLFKSGARGIISSRCSFLGGNLVTFLRPTATVTSKFKKCGGALNAT
CRDEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDQDALHVRLADEAVCIGEAPSNQS
YLFIPNVLSAAVSRDCTMLHPGYGFLSENATFVDICRDHGINFIGPNPDSIRVMGDKATA
RETMKKAGVPTVPGSDGLLQTTEEAVRLAHEIGFPVMIKATAGGGGRGMRLANEPDEFVK
LLQQAKSEAAAAFGNDGVYLEKYIKNPRHIEFQVLADKHGNVVHFGERDCSIQRRNQKLL
EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPV
TEMISSTDLIEEQIRVALGEKLQYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITAYL
PSGGPFVRMDSHIYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALADTVITGIPTTI
DYHKLILEIEDFKDGKIDTAFIPKHEKDLAAPQQLVPFTFPAKEMAGVNA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttgatccagtgcagatcattctgctctccatcagatttgttcaaaagtggg
gcaagaggaatcataagttcaagatgcagctttctgggtgggaaccttgtaacatttctt
agaccgacagctaccgtaactagcaaattcaagaaatgtgggggagcattaaatgctaca
tgtcgagatgagaaaatcctcgtggccaataggggtgaaattgcagtgcgtgttatccgc
actgcccacgagatgggtattccatgcgttgctgtttactcgacaatagaccaggatgca
cttcatgtcaggcttgcagatgaggcagtttgcattggggaagcaccaagtaaccaatcg
tatctgttcattccaaatgttctatctgctgctgttagccgtgattgcacgatgttgcat
cctggatacggtttcctctctgaaaatgcaacttttgttgatatctgtagagaccatggt
atcaatttcattggacccaatccagatagcatccgtgttatgggtgacaaagctactgct
agggaaacaatgaagaaagctggtgttccaaccgttccaggaagtgatggattgctacag
acaacagaggaggctgtcaggcttgctcatgagattggttttcctgttatgataaaggca
actgctggtggtggaggacgtggaatgcgtctggctaatgaaccagatgaatttgtgaag
ttgttgcagcaagccaagagtgaggctgctgccgcatttggaaatgatggtgtttattta
gaaaaatacattaaaaatccccgtcacattgagtttcaggttctggcagataagcatggc
aatgttgtccattttggtgaacgagattgcagcattcagcgaaggaatcagaaactttta
gaggaagctccctccccagcattgaccccagaacttagaaaagctatgggtgatgctgct
gtggcagctgctgcatctataggttatataggtgttggaacggttgagttcctcttggat
gaaaggggttcgttttactttatggaaatgaacaccaggatacaggtggaacatccagtc
acagaaatgatctcttctacggatttgatcgaggaacaaattcgtgtagcacttggagag
aagcttcaatataaacaggaagatattgtacttagagggcattctatcgagtgccgtatc
aatgcagaggatgcgttcaaaggattccgacctgggcctggaaggataacagcatacttg
ccatcaggagggccatttgttagaatggacagtcatatttatccagattacgtggttcct
cctagctatgattcacttcttggaaagctcattgtttgggccccgacccgagagaaagca
attgaacgtatgaagagggctcttgcggacactgttataacaggaattccaacaaccatt
gattaccataaactcatccttgagattgaggatttcaaggatggaaaaatcgacacggca
ttcattccaaagcatgaaaaggatttggcagcgccacaacaactcgtccccttcaccttc
ccagcaaaagaaatggctggggtcaatgcttga
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