Amborella trichopoda: 18427232
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Entry
18427232 CDS
T02990
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
atr
Amborella trichopoda
Pathway
atr00900
Terpenoid backbone biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
18427232
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atr01006
]
18427232
Enzymes [BR:
atr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
18427232
Prenyltransferases [BR:
atr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
18427232
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Ta1207
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
18427232
NCBI-ProteinID:
XP_006836349
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MFVMRALCKLSSRSRFPWRVAEGDRRFLTVAACSHGTMSGRFYSVSTLLPFNPEVLGCKE
IYHIWSSHAYHDARYQIHQERSSIIEEPVDPFSLVADELSILANRLRAMVVAEVPKLASA
AEYFFKMGVEGKRFRPTVLLLMASALKMSIPESATDTALNSLSKELRARQQCIAEITEMI
HVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLA
TVVEHLVTGETMQMTTSSDQRCSMDYYLQKTYYKTASLISNSCKAIALLAGQTAEVSVLA
YDYGRNLGLAYQLIDDVLDFTGTCASLGKGSLSDIRHGIVTAPILFAMEEFPQLRMVVDK
GFEDPDNVDIALDYLGKSQGIQRTKDLAAEHASLAAAAVDSLPPTNNEDAIISRRALVDL
TQRVISRTK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgatgcgtgctctctgcaagttaagctctaggtctaggtttccatggcgagtt
gcagagggtgatcgaaggtttttaactgtggcagcttgtagccatggaaccatgagtggg
aggttttatagtgttagtactttgcttcctttcaatccagaggttttgggttgcaaagaa
atttatcatatctggagttcacatgcttaccatgatgccaggtatcaaattcatcaggag
agaagctccattattgaggaaccagttgatccattttcacttgttgccgatgaattatca
atccttgcgaatagattacgtgcgatggttgttgctgaggttccgaagcttgcctcggct
gcagaatacttcttcaagatgggcgttgagggaaagcgtttccgtcctacggtattgttg
ctaatggcatcagctttgaagatgtcaatacctgaatcagcaacagatactgcactcaat
agtttatcaaaggaactacgggcacggcaacagtgcattgccgagatcactgagatgatc
catgtggcaagccttcttcacgatgatgttctagatgatgcagacacaaggcgtggtatt
ggttccttgaattttgttatgggaaataagctagctgtactagcaggggattttcttctt
tcaagagcatgtgtagcacttgcatcattaaaaaatacagaggttgtgacattgctggct
actgtcgttgagcaccttgttactggagaaacaatgcaaatgacaacctcatctgatcaa
cgttgtagcatggattactacttgcagaagacatattacaagacagcctcacttatctca
aacagctgtaaagctattgctctgctggcggggcagacagctgaagtttctgtgcttgct
tatgactatggtcgaaatttgggcctggcatatcagttgattgatgatgttcttgacttc
actggcacatgtgcttcccttggcaagggttccttgtcagatatacgtcatggaattgtg
actgctcctatattatttgccatggaagagttccctcagttgcgtatggttgttgataag
ggctttgaagatcctgataatgtcgatatcgcccttgactaccttggtaaaagccaagga
atacaaaggaccaaggatttggcagctgagcatgcaagccttgccgctgcagctgtcgat
tctcttcccccaactaataacgaagatgccattatatccagaagggccttggtggacctc
actcaaagagtcatctccagaacaaagtga
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