Amborella trichopoda: 18431727
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Entry
18431727 CDS
T02990
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18431727
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
18431727
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
18431727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
18431727
NCBI-ProteinID:
XP_020521337
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MINLQLGALESTFEARLQGFTQYIEMEEQSPFKEENESWRVLEFYSGIGGMRYSLLQAKL
PATIVEAFDINDMANDVYQHNFGHRPHQGNIQCLSAVELDKFAAHAWLMSPPCQPYTRQG
LQKDADDARASSFLEILKQIPHASKPPFMLFVENVVGFETSRTREHLMEILERTGFVAQE
YILSPVQFGVPYSRPRYFCLAKRKPLSFTNPSINDQLVRAAPFLLHEYCSAMDDNISEEM
SHISCKQIKDFLETDSFLSDISRNTRSEHCEMLDETPDDLVGISIEEHCVPDGRVILQAF
KSTNGSAESNAEKNDVLHGTLSPYTVPLSLIERWGSAMDIVYPDSRRCCCFTKSYYRYVK
GTGSLLATVRVQRKQPLDGKVELSELGLRYFTPREVANFHSLPENFEFPEHINMKQRYAL
LGNSLSVAVVAPLLRYLFTDSRGCPPHE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgataaatttgcaacttggagccttggagagtacgtttgaagctcgattgcaagggttc
actcaatacatagagatggaggagcagagccccttcaaagaagaaaatgagtcatggaga
gtgttggagttctatagcggcataggaggcatgagatactcactactgcaagcaaaactt
ccagccactatagtggaagcatttgacattaatgacatggcaaatgatgtgtatcaacac
aattttggtcatcgtccccatcagggtaacattcaatgcctctctgctgtagagttagac
aaatttgcagcacatgcatggcttatgtctcctccatgtcaaccatacacacgacaaggt
cttcaaaaggatgctgatgatgctcgggcatcctctttccttgaaattctaaaacaaatt
ccacatgcatcaaaaccacctttcatgctatttgtggaaaatgtggtaggatttgagaca
tccagaacacgagaacacttgatggaaattttggagagaactggatttgttgctcaggaa
tacattttgagcccagtgcagtttggtgtgccatattctagacctcgatacttctgcctg
gctaaaagaaaaccattatcttttacaaatccaagcatcaatgatcaactagttcgggcg
gctccttttctgctacatgagtattgcagtgctatggatgataacatctctgaagaaatg
tctcatatatcatgcaaacaaatcaaggattttcttgaaactgatagtttcttaagtgac
atctctaggaatacaagatccgagcattgcgaaatgcttgatgaaacaccagatgatctt
gttggcatttctatcgaggaacattgtgttccagatggaagggtaatcttacaagcattc
aaaagtacaaatggctcggccgaaagcaatgctgaaaagaacgatgttctacatggtaca
ttgagtccatatactgttccgttgagcttgattgagaggtggggaagcgccatggatata
gtttacccagattcgagacgttgttgctgttttaccaaaagctattaccgatatgtgaag
ggaaccggctccttgctggcaacagtcagagtacagaggaagcaaccattagatggaaaa
gtggaactttctgagctaggtctcagatattttactcctagagaggttgctaatttccat
tctttaccagagaattttgagtttcccgagcacataaacatgaagcaaaggtatgcttta
ctgggaaacagtttaagtgttgcagtggtagcaccattgctcagatatttgttcacagac
tctcgtggttgcccacctcatgaatga
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