Amborella trichopoda: 18435279
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Entry
18435279 CDS
T02990
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
atr
Amborella trichopoda
Pathway
atr00040
Pentose and glucuronate interconversions
atr01100
Metabolic pathways
Module
atr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18435279
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
18435279
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18435279
NCBI-ProteinID:
XP_006845389
UniProt:
W1PH95
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MGFSKNNSKAWALLCYVVFIAIAYVAAVEAANGNSSSAGEFNVMQFGAIADGTTDNSEAF
GAAWKAACEWKGPSRLLIPEGTFLVGPVLFKGPCPSASPMVVQVKGKVKALTDMSKYPSD
EWIVFQYVDGLVVTGGGTFDGQGASAWRLNQCPKKAHCKLLPTSLKFNFITNGEIRGIHS
VDSKLFHMLLFGCKNLNVQSIKISAPADSPNTDGIHVGSSSNITISRSHIGTGDDCISLG
PGSTQVTVKNVFCGPGHGISVGSLGKFSKEEGVQGLHVENCTISDTTNGLRIKTWAGSDS
SSASNFTYEDIVMNNVANPIIIDQQYCPYSSCPQKGPSRVKINDISFKNIRGTSASKIAV
NLLCSEAFPCQNVQLDDIKLEYNGQGEASTASCTNVKGVSTGIQIPPTCI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctccaaaaacaactccaaagcatgggcattgctttgttacgttgttttcata
gcaatagcatatgtggctgctgtagaggcagcaaatggcaactcttcttcagctggagag
ttcaatgtgatgcaatttggtgccattgctgatggaaccacggacaacagcgaggctttc
ggagcagcgtggaaggctgcatgcgagtggaaagggccatcacgccttttgatccctgaa
ggaacgttccttgtcggtccagtcctattcaagggtccgtgccccagtgcctcacccatg
gttgtacaagtgaagggcaaagtgaaggctttgacagatatgagcaaatacccttccgac
gaatggatcgtgttccagtatgtagatggcctcgtggtaactgggggagggacgtttgac
ggccagggagcatctgcatggcgcctcaaccagtgtcctaagaaagcccactgcaaactt
ctccctacgtcattgaaattcaatttcattacaaacggggagataaggggcatacattca
gtggatagcaagctctttcatatgttattatttgggtgcaagaacttgaatgtccaatcc
atcaaaatctcagcgccagctgacagccccaacactgatggcatccatgtcggatcatct
tccaatatcacgatctcaagatctcacattggaaccggtgatgattgcatttcccttggg
cctggaagcacccaagtaaccgtgaagaacgtgttttgtggaccaggacatggcattagt
gttggaagcttgggcaagttctccaaggaggagggtgtgcaagggcttcatgtggagaat
tgcaccatctcagacaccaccaatggtctgaggatcaagacatgggcaggctcagacagc
agctcggcctccaatttcacatatgaagacatcgtgatgaacaacgtggccaaccccatc
atcatagatcagcaatattgcccttactcttcttgcccacaaaagggtccctctcgagtc
aagatcaacgatataagtttcaagaatataagaggaacctctgcttccaaaattgcagta
aatctattgtgcagtgaggctttcccgtgccaaaatgttcagcttgatgacatcaaattg
gagtacaatggacaaggggaagcttcgacggcctcgtgtaccaatgtaaaaggggtctct
actgggatacaaataccaccaacttgcatctag
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