Amborella trichopoda: 18436927
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Entry
18436927 CDS
T02990
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
atr
Amborella trichopoda
Pathway
atr00270
Cysteine and methionine metabolism
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
18436927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18436927
03032 DNA replication proteins [BR:
atr03032
]
18436927
03036 Chromosome and associated proteins [BR:
atr03036
]
18436927
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
atr02048
]
18436927
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
18436927
Transcription factors [BR:
atr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
18436927
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
18436927
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
18436927
Prokaryotic defense system [BR:
atr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
18436927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
18436927
NCBI-ProteinID:
XP_006847211
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MGSAALVDMGEKIGLADRIKRTRSSSSTPVPAGAKTKSAMDTAVKRQKPTKATTTTNNYN
KKRTADAPPERNSTSDIENPSRRRLPKRAASCSNFKEREKPLRLNQDDYILPKVQQTIAD
DEQTAIQLTRKGDEEEEQTPQRRLMDFIIHDSDGTPQPFEMSEVQDLYISALILPAGPTS
STDKNCGACCEGFGRIESWSISGYDEGKPLIWVSTDLAEYSLLKPSSQYKKHFDIFSDKA
LLSVEVFKKLSKFHGGYPLIGLDELLASLARALGSRKGGLTRDFIISQGEFVANQLYGLD
STSSNNDQVFAGLPVLTSWRNECQMREPSCRLTKVKDGSLKIGNGLASSASSSPDVMEDE
SEKMARLLQEEEVWREMKQKKGHVFTSSKSKKYYVKINEDEIVNDYPLPAFYKASEEEMD
EYVFFDEDLHTLAPDDLPRRMLHNWALYNSDSRLVSLELLPMLPGTETDVTIFGSGSMTE
DDGSGFCIDVKGPSGSSSNGALDEVSNKGIPVYLSAVKEWMIEFGASMLFISIRTDGAWY
RLGKPSKQYAPWYEPVLRTATLAIGIITMLKEQSRVSRLSFNDVIRKLSELPKGDPICIS
SNQAAVERYVVVHGQIILQQFAEFPDENIRKSAFVSGLSMKMEQRHHTKLAMKKKLMLVR
KEANMNPRAAMRPEITKKKQMRATTTKLINRIWSDYYSNFEVENGVEPTKGGKEEEDEEV
ENEENEDEEEEEEEEGEALASRPISNGGESAFVKTNSSNGMSKPSTTSNSQKSNGEITRW
VGDCVGKVASSGNVLYKSASILGDMVLVGGFVIVEPDSYDELPAILFVEYMFENSDGVKM
IHGRLMQRGSQTVLGNAANAREVFLTDECMDVELSEVKQSVVVDVRQRPWGQKYRKENEA
SDKVDKARAEEMEKKGLPIEYYCKSLYLPDRGGFFKLPCETMGLGTGVCVSCSCKEGVNK
EFRMLSDKSGFVCKGVQYTLLDFVYVNPQVFAVSVEQEKFKAGRNVGLRAYVVCQLLEIE
VSGGSKKVDSIKTTKLKVRRFYRPEDIGTEKAYTADIREVYYSEEICTVPLDMLEGKCEV
RKQHDLPSLHGPVTFDHIFFCLCVYDPVNGSVKQLPSGTKLRYSKGTLSGNGKNKGKAVE
GESPSQKKSHSPNNCLATLDIFAGCGGLSEGLQKSGVGFTKWAIEYEEPAAEAFKLNHPE
AHVFCDNCNVILRAIMEKCGDIDDCICTPEAADHALKLSEDKKNNLPLPGQVDFINGGPP
CQGFSGMNRFNQSTWSKVQCEMILSFLSYADYFRPRFFLLENVRNFVAFNKGQTFRLTLA
SLLEMGYQVRFGVLEAGNYGVAQSRKRAFIWAASPNETLPEWPEPMHVFASPQLKITLSD
DSQFSAVRSTSEGAPFRSMTVRDTIGDLPPVGNGADKVEIKYGSDPASWFQKQIRLNEEV
LIDHVTKEMNGLNFIRCQKIPKRPGADWRDLPDEKVKLSNGQLVDLIPWCLPNTSERHNQ
WKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYRFCGNI
HNKYRQIGNAVPPPLAMVLGRKLKEALDAKARTFDEPRNLNMSTI
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgcagctctcgtggacatgggtgaaaaaattggccttgcagatcgaatcaag
agaacacgcagttcttcttcgaccccggttccagcaggcgccaaaaccaagtccgcaatg
gataccgctgtcaagaggcaaaaacccaccaaagccaccaccaccaccaacaactacaac
aagaagcgaactgcagatgcaccccccgaaagaaacagcacttctgatatagagaacccc
tcaaggaggaggctcccaaagcgtgctgcctcttgctccaacttcaaggagagagagaaa
cctctccgcctcaatcaagatgactacatcctccccaaggtgcagcagaccatcgctgat
gacgagcagaccgccatccagttaaccagaaaaggggatgaagaagaagagcaaacccct
caaaggaggctcatggatttcataatccatgatagcgatggcacccctcagccttttgag
atgtccgaagtccaagacctctacatctctgccctaattctcccggcaggccccacttct
tccaccgataagaactgtggggcctgctgtgaggggtttggtaggatcgagtcatggtcg
atctcgggctatgacgagggtaaacctcttatttgggtttccactgatctcgctgaatac
tctcttctcaaaccctcttctcaatacaagaagcattttgacattttctctgataaggcc
ctgctttctgttgaggtattcaagaagctctcaaagtttcatggcggctacccacttatt
ggtcttgatgagcttcttgctagtttggctcgagcacttggttcgcggaagggaggcttg
acaagagatttcattatatctcaaggggagtttgttgccaatcaattgtatggtctcgac
agtacctcttcaaacaatgatcaggtatttgctgggctgcctgtcctaacttcttggaga
aatgagtgtcaaatgcgcgagccaagctgtaggctgaccaaggttaaggatgggagcctg
aaaattggcaatggcttggcttcctctgcctcttcgtcccctgatgtgatggaagatgag
agtgagaagatggctcgactcttgcaagaagaggaagtgtggagagagatgaaacagaag
aagggccatgtattcacttcatcaaaatcaaagaaatattatgtgaagatcaatgaggat
gagattgtcaatgactacccattaccggccttttacaaggcttctgaggaggagatggat
gagtatgtgtttttcgatgaagatcttcatacattggccccagatgatctccctcgacga
atgctccacaattgggccctctacaactctgactcgaggctcgtttcattagagctgcta
cccatgcttccaggaactgaaaccgatgtcacgatttttgggtctggatcgatgactgaa
gatgatggcagtgggttttgcattgatgtaaagggacccagtggctcatcctcaaatggg
gctttggatgaagtttcaaacaaaggaatacctgtgtatttgagtgctgtaaaggagtgg
atgattgaatttggagcatcaatgctcttcatatcaattcgaactgatggtgcttggtat
aggcttgggaagccctcaaagcaatatgctccttggtatgaaccggtgctcaggactgca
acgctagccataggcatcataaccatgttaaaggagcagagcagagtgtcaaggctttca
ttcaatgatgtcatcaggaagctctctgagctgcctaaaggggaccctatatgtatctca
tcaaatcaggcagcagttgagagatatgtcgtggtccatggtcagattatactccagcaa
tttgcggagttccctgatgagaacattcgcaagagtgcctttgtctcaggcctctccatg
aagatggagcagaggcaccacactaagctggcaatgaaaaagaagcttatgttggtgagg
aaggaagccaacatgaatccaagggcagccatgaggcctgaaatcacaaagaaaaagcaa
atgagggccacaaccaccaaactgattaaccgaatatggagtgactactactctaatttt
gaggttgagaatggtgttgagccaacaaaaggtgggaaagaggaagaagacgaggaggtg
gagaatgaagagaatgaagatgaagaagaagaggaggaggaagagggagaggctcttgct
tctagacctatctctaacggtggtgagtctgcttttgttaaaaccaactctagcaatggt
atgtcaaagccatctactacatcgaattctcaaaaatcaaatggggaaattactagatgg
gttggggattgtgtgggcaaagtggcttcttctgggaatgttctttacaagagtgcttct
attcttggagatatggttttggtgggtgggtttgtaatagttgagcccgattcatatgat
gaactgcctgcgattctctttgtagagtacatgtttgagaattcagatggggtgaagatg
attcatggcaggttaatgcagagaggatctcagactgtattgggaaatgctgcaaatgct
agagaggtctttttgactgatgaatgtatggatgtcgagttgagtgaggtgaaacagagt
gtagttgtggatgtaagacagaggccatggggccaaaagtacaggaaggagaatgaagct
tccgataaggttgataaggcaagggctgaggagatggagaagaaaggattgcctattgaa
tactactgcaagagcttgtatctgccagatagaggtggcttttttaagcttccttgtgaa
accatgggtcttggaactggggtttgtgtctcgtgcagttgtaaagaaggtgtaaacaag
gagttcaggatgctctctgataagtctggctttgtgtgcaagggcgtccagtacactctg
cttgattttgtgtatgtgaacccccaagtatttgctgtgagtgtggagcaggagaaattt
aaagctggcaggaatgtgggtctcagagcatatgttgtttgccagcttctagagatcgag
gtgagtggtgggtctaaaaaggtggactcaataaagacaacaaaactcaaggtcagaaga
ttttacaggcccgaggatattggaactgagaaggcgtatactgctgatattcgagaagtc
tactacagcgaagaaatatgtacagttcctcttgacatgctggaagggaagtgtgaagtt
agaaagcagcatgaccttccatctttgcatggtccagttacttttgaccatatcttcttc
tgtttgtgtgtatatgatcctgtgaatggcagtgtcaagcagttaccttctggcacgaag
ctgcggtattcaaaaggaacattgagtgggaatggaaagaacaagggaaaggctgttgaa
ggagagtccccctcccaaaagaagagccattctccgaataactgcttggccactcttgac
atttttgctggttgtggtggcttgtcggagggtttgcagaaatcaggggttggtttcacc
aagtgggcaattgagtatgaggaacctgctgctgaagcattcaagctcaatcatccagag
gcccatgtgttctgtgacaattgcaatgtgattctcagagcaataatggaaaaatgtggc
gatatagatgactgcatctgtactcctgaggctgctgaccatgctttgaagctaagtgag
gataaaaagaacaatctaccattaccaggacaagtagatttcatcaatgggggaccccct
tgtcagggattctctggtatgaaccgatttaatcagagcacttggagtaaggtccaatgt
gagatgatattgagctttttgtcatatgctgattacttccggccaagatttttcttattg
gagaatgtgcgcaactttgtagccttcaacaagggtcaaacctttcgtttaacacttgca
tcactccttgaaatgggttatcaggtaagatttggcgtgctagaagctggaaactatggt
gttgcccagtcgaggaagagggcattcatttgggctgcttctccaaatgagactctccca
gagtggccagagccaatgcatgtctttgcaagcccacaattgaaaatcacattgtctgat
gattcacaattttctgctgtaagaagtacatcagaaggtgcaccctttcgctccatgact
gtgcgggatactattggtgatctgcctcctgtcgggaatggtgcagataaggttgagatt
aagtatggcagcgatcctgcttcttggttccaaaaacaaatccgcctgaatgaggaggtt
ctcattgatcacgtaacaaaagaaatgaatgggttgaattttatcagatgccaaaagatt
cccaagcgaccgggggctgattggcgtgatcttcctgatgagaaggtgaagctgtccaat
gggcaattggtggatctgataccttggtgtctacccaacacttcagagagacataaccag
tggaaggggctgtttgggaggctggactggcagggcaacttcccgacttccattactgat
ccacagcccatgggcaaggttgggatgtgcttccatcctgaccaggacagaatacttaca
gttcgtgagtgcgctcgctctcagggcttcccggacagctacagattctgtgggaacatt
cataacaagtatcgacaaatagggaatgcagtgccgccacctctagcaatggtgcttggg
aggaaactcaaagaagcactggatgccaaagcacggaccttcgatgaaccaagaaacctg
aacatgtctaccatttga
DBGET
integrated database retrieval system
