Amborella trichopoda: 18438075
Help
Entry
18438075 CDS
T02990
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
atr
Amborella trichopoda
Pathway
atr00600
Sphingolipid metabolism
atr01100
Metabolic pathways
Module
atr_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
18438075
Enzymes [BR:
atr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
18438075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18438075
NCBI-ProteinID:
XP_011624880
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MDETALGLRASANAFLSQYEPLTLVLTPVVGLLVAILLHFIIHFLLENGIKRSFVGLIMG
AVKLVPGVNKYIEGEKQKVVDKLQSGIKCKRESWQTELPHIGLGREVIGRLTSQKEKDVN
WQGRCSGTVYIGGHESEGHFLLTNEAYSMFSHTNPLHLDVFPSIAQFEGEVVAMTASLLG
SKEEASGGQVCGNMTSGGTESILLAVKTTRDYMKIKKGIKKPEMVIPESAHSAYDKAAQY
FNIKLWRVPVNEEFQADVKKIRRSINKNTIMIVGSAPGFPHGIIDPIEELGELALNFGIC
FHVDLCLGGFVLPFARKLGYPLPCFDFAVQGVTSISVDVHKYGLGPKGTSVVLYRNREIR
KANCCLDPQHQFVAVTEWSGGLYVSPTVAGSRSGGLIAGAWAAMMSLGLEGYMEHTRVLM
ETSKRIQNGIKEISELFIIGKPHMTVIAFGSKVIDIFKVNDVMSSKGWHLNALQKPSSVH
ICVTLQHTPVVEDFLIDLKESVKIVKEEPGTIEGGLAPIYGAAEKMPDRGMVQDLIVAFM
DSTC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacagccctaggcttaagggcctctgctaatgctttcttatcacaatacgag
cctttgaccctcgtccttacccccgtagtggggctattggttgcaattcttcttcatttt
atcattcatttcttacttgaaaatgggataaagcgatcattcgtgggactgataatggga
gctgttaagttggttcctggtgtaaacaagtatattgaaggggagaaacaaaaggtagtt
gacaagttacagtctggcataaaatgtaaacgagagagttggcaaactgaactgccacat
attggacttgggagagaagtcatagggaggttgacatctcagaaagaaaaagatgtgaac
tggcaaggcagatgctctggtacagtctacattggtgggcacgaatctgaaggacacttt
cttttgacaaatgaggcctattcaatgttttcacataccaatccattgcatctggatgtt
ttcccaagcattgctcagtttgaaggagaagtagttgccatgacagcttctctacttggc
agcaaagaggaggcttctggaggtcaagtttgcggtaacatgacttcaggaggaactgaa
agtatattgcttgctgttaagaccactcgtgattacatgaaaataaaaaagggaataaaa
aagccagagatggtgattcctgaatctgcacattcagcatatgacaaggctgcacaatat
tttaacattaagctgtggcgggtccctgtaaatgaagaatttcaggcagatgtcaagaag
ataaggcgttctattaacaagaacacaattatgattgttggatctgcaccagggtttcct
catggtattattgatcctatagaagaacttggagaattggcattgaattttggtatttgt
tttcacgtggacctatgtcttggtggttttgtgttgccttttgctcgcaagttagggtac
ccacttccatgttttgattttgctgttcaaggagtaacatcaatatcagtagacgtgcat
aagtatgggttaggtccaaagggaacaagtgtggtgctttataggaatcgtgaaattcga
aaggcgaattgctgtttggatccacagcaccaatttgttgctgttacagaatggtcaggg
ggactttatgtttctcctactgtggctggtagcaggtctggtgggttgattgctggagct
tgggcagctatgatgtctctaggattggaagggtatatggaacatacgagggtgcttatg
gaaacatccaagagaattcagaatgggataaaggaaatctcagaattattcatcattgga
aagccccatatgacagtaatagcatttggatcaaaggtgatagatattttcaaagttaat
gatgttatgtcatccaagggttggcacttaaatgccctgcaaaagccaagcagtgtgcat
atctgcgtaacccttcagcacacacctgttgttgaggatttcttgatagatttaaaagaa
tccgtgaaaattgttaaagaagaaccaggaacaattgaaggtggccttgctcccatttat
ggagctgccgagaaaatgcctgatagaggaatggttcaggatttgattgtggctttcatg
gatagtacttgttag
DBGET
integrated database retrieval system
