Amborella trichopoda: 18443811
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Entry
18443811 CDS
T02990
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18443811
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18443811
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18443811
03036 Chromosome and associated proteins [BR:
atr03036
]
18443811
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18443811
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18443811
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18443811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
SCD
Cnd1
Adaptin_N
TAF6_C
CLASP_N
Motif
Other DBs
NCBI-GeneID:
18443811
NCBI-ProteinID:
XP_006854054
UniProt:
U5CQS6
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DLVDWFIPLVKRLASGEWFTARVSSCGLFHIAYPSAPEMLKAELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVEPNYLKTDIMSIFEDLTHDDQDSVRLLAVEGCAALGKLLEPQDCAA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIDQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDQVFSIREAAANNLKRLAEEFGPDWAMLHIVPQV
LEMINNQHYLHRMTILHAIALLAPVMGSDITCQKLLPVVINAAKDRVPNIKFNVAKVLQS
LIPILDQSVVEQTVRPCLADLSEDPDVDVRFFSGLALQACDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatagatgagccactctatccaattgctatactgattgatgagcttaaaaat
gaggacattcagctgcgactgaattcaatccgtaggctctcaacaattgcacgggctctt
ggtgaagagagaaccaggaaggaactaatccctttccttagcgagaacaatgatgacgat
gatgaggttcttcttgcaatggcggaggaattgggtgtgtttatcccttatgttggtggg
gtggaacatgcccatgtgttgttgccaccattggagacactttgtactgtggaggaaact
tgtgtgagggacaaagctgtggagtcattatgtcgaattggggctcagatgaaggaaagt
gatttggtggactggtttatccctctggttaagagactcgcatccggtgaatggtttact
gcacgagtttcgtcatgtggtctgttccacattgcttacccaagtgcaccagaaatgttg
aaggcagaactaagatccatatacagccagttgtgtcaagatgatatgcctatggttaga
agatctgctgcatccaacctgggaaaatttgctgctacagttgaaccaaattatctgaag
acagacatcatgtcaatttttgaggatctcacacatgatgatcaggattctgttcgtttg
ttggctgttgagggttgtgctgctcttggaaaattgttggaaccacaggattgtgcagca
catatcttacctgtcattgttaatttctctcaggataaatcttggcgtgttcgttacatg
gttgcgaatcaattatacgaactttgtgaagctgttggccctgagcctaccaggtctgac
ctagtgcctgcatatgttcgattattgcgagacaatgaggcagaagttcgcattgcagct
gcaggaaaagtgaccaaattttgccggatattgaatccacagcttgctattcagcacatt
ctcccttgtgtaaaggaactatcctcagattcttcgcaacatgttcgttctgccttggct
tctgtaataatgggaatggcacctgttttaggaaaggatgcaacaattgatcaacttctt
ccaatctttctatcccttctaaaggatgaatttcctgatgttcgtctcaatattattagc
aagcttgatcaagtaaaccaggtgattggaattgatctcctgtcccaatctctcttgcca
gccattgttgaacttgcagaggatcggcattggagagttcgccttgcaataattgagtac
atcccattattagcaagccagttgggtgtgggattctttgatgacaagcttggagctctt
tgcatgcagtggttgcaagatcaggttttctcaatccgtgaggctgcggcaaataacttg
aagaggcttgctgaagaattcggccctgattgggcaatgctgcacatagttccacaggtc
ttggaaatgataaacaaccagcattatttgcatcgtatgaccattcttcatgcaattgct
cttctcgctccagttatgggttcagacatcacatgccagaaactcctacctgtggtcatc
aacgctgcaaaggacagggttccaaacattaaatttaatgtggctaaggtgttgcagtct
ctcattccgatccttgaccagtctgttgtggaacagactgtacgtccctgcttggctgac
ctaagcgaagaccccgatgtggatgtgaggtttttctctggtttggcacttcaggcctgt
gatcaggtgatgatgtcttcttaa
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