Amborella trichopoda: 18444788
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Entry
18444788 CDS
T02990
Name
(RefSeq) beta-galactosidase 8 isoform X2
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
atr
Amborella trichopoda
Pathway
atr00052
Galactose metabolism
atr00511
Other glycan degradation
atr00531
Glycosaminoglycan degradation
atr00600
Sphingolipid metabolism
atr00604
Glycosphingolipid biosynthesis - ganglio series
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
18444788
09103 Lipid metabolism
00600 Sphingolipid metabolism
18444788
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
18444788
00604 Glycosphingolipid biosynthesis - ganglio series
18444788
00511 Other glycan degradation
18444788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18444788
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
18444788
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18444788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
18444788
NCBI-ProteinID:
XP_011627267
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MRKESALAKIFMMLRMRSFLRLFILGAVIMWAFMPALFPIPTLSASPHQQSLEVSRKGFW
ISNDMFWKDNVPYRIIGGDVHYFRVLPEYWEDRLLRAKALGLNTIQTYVPWNLHEPQPGK
WVFEGVADLESYLKLANEMGFIVMLRVGPYICAEWDFGGFPAWLLSVEPPLRLRSSDLAY
LLLVERWWNYLLPKLVPLLYNNGGPIIMVQVENEYGSFGDDKKYLHHLVALARVHLGEDV
ILYTTDGGSRDTLDKGTVLRKDVFAAVDFSTGENPIPIFELQKKYNAPGRSPALSTEFYT
GWLTHWDERIAKTDASSTAVALDTILSQNASVVLYMAHGGTNFGFFNGANTGQSAFDYKP
DLTSYDYDAPIKEFGDVENPKFKALRAVIQKHSTGQLPPIPLNKGSRAYGQVKVKKIGSL
FELLDFITEPTKVVKTHQPMPMEKLGQFYGFMLYVSEYPSKEFGRVLSIKQVKDRAQVFV
ACKSTKILHSPIYVGKIERWSSVDLHLPSLICPDNISILILVENMGRVNYGPFIYDRKGI
LSDVMLDGSPLYGWRIFPISFDGISNISNVNLIKQAPISRTLKKIIQNDSMSHLKLSKGP
GVFEGHLSIDSSDEVKDTFISLKGWNKGVLFVNNFNIGRFWVSVGPQCTLYLPAPLLHYG
ENVVVILELEDPNPDLLLNFVDGPDFTCYAKSPKPNLI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagaaagtgctttggccaaaatcttcatgatgcttcgaatgagaagtttctta
cggctgtttatcttgggcgcagtgattatgtgggctttcatgccagctttgttccccatt
cccactctttctgcttccccccaccaacaatccctagaggtcagcagaaaaggtttctgg
atttccaatgatatgttctggaaggataatgtgccatatcgtataatcggtggtgatgta
cattattttcgagttcttccagagtactgggaagatagactattgagggcaaaggctctt
gggttgaatactatacagacctacgtgccttggaatttgcatgagcctcagcctgggaaa
tgggtatttgagggtgttgcagatcttgaatcctatctcaagctggctaatgagatggga
tttattgtcatgcttcgtgtaggaccatatatatgtgcagagtgggattttggaggcttt
cccgcttggttactctctgtggaacctcctctcagattaagatcatctgatcttgcatat
ctgctcttggttgaaagatggtggaattatctccttcctaagctagttccactactttat
aataatggtggacctattattatggttcaggttgaaaatgaatacggatcatttggagat
gacaaaaagtatcttcatcacctagttgctttggctcgagtacatcttggagaagatgtt
attttgtatactaccgatggaggatctcgagatactcttgataaaggaactgtacttagg
aaagatgtatttgcagctgttgacttttcaactggtgaaaacccaatccctatatttgaa
ctgcagaagaaatataatgctccagggagatctcctgctctttcaacggagttctacact
gggtggcttacacattgggatgagagaattgcaaagacggatgctagttcgactgctgtt
gcactagacaccattttatctcaaaacgcatctgtggtgctttatatggcacatggtgga
acgaactttggttttttcaatggtgcgaatactggtcaaagtgcatttgactacaagcct
gatctcacgtcatatgattatgatgctccgataaaagaatttggagacgtggagaacccg
aaattcaaagcactacgggctgttattcaaaaacatagcactggacaactgcctcccata
ccattaaataaaggaagcagagcatatgggcaagttaaagtgaagaaaattggttctttg
tttgagttacttgattttattactgaaccaacaaaagtggtcaagacacatcagccaatg
cccatggaaaaattagggcagttttatggatttatgctctatgtatcagaatatccatct
aaggaatttggaagagtcctttctataaaacaggtcaaggatagagctcaagtgtttgtt
gcatgcaagtcaacgaaaatcttacattctccaatatatgtcggcaaaattgagagatgg
tcaagtgtggatcttcatcttccaagcctcatttgtcctgataacatcagtatacttatt
ttggttgagaacatgggtcgtgtaaattatgggcctttcatttatgacaggaaggggata
ctttctgatgttatgttggatggctctcctctttatggatggaggatatttccgatctcc
tttgatggaatcagcaatatttcaaatgttaatcttattaagcaggctccgatatcaaga
actttgaagaaaattattcaaaatgactctatgtcccatttgaagttatccaaaggacca
ggagtctttgaaggccatctttcaattgactcatcagatgaagttaaagatacatttata
tcattgaaaggttggaacaagggtgttctctttgttaacaactttaacattggaaggttc
tgggtgtctgttggaccccaatgcaccctttatcttcctgctccactgctgcattatgga
gaaaatgttgtggtcattttggagcttgaagatccgaatcctgatctcttgttgaacttt
gtagatggacctgattttacatgctacgcaaaatcaccaaaaccaaatcttatttag
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