Amborella trichopoda: 18445079
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Entry
18445079 CDS
T02990
Name
(RefSeq) cyclin-dependent kinase D-1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
atr
Amborella trichopoda
Pathway
atr03022
Basal transcription factors
atr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18445079
09124 Replication and repair
03420 Nucleotide excision repair
18445079
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atr01001
]
18445079
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18445079
03019 Messenger RNA biogenesis [BR:
atr03019
]
18445079
03400 DNA repair and recombination proteins [BR:
atr03400
]
18445079
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
18445079
2.7.11.23 [RNA-polymerase]-subunit kinase
18445079
Protein kinases [BR:
atr01001
]
Serine/threonine kinases: CMGC group
CDK family
18445079
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18445079
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
18445079
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18445079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
DUF6193
Motif
Other DBs
NCBI-GeneID:
18445079
NCBI-ProteinID:
XP_006855287
UniProt:
U5D2U5
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADTSLDQLPDKRVAARYIKGVTLGEGTYGIVFKALDTKTNQTVAIKKIRLGKHKEGVNV
TALREIKLLKELKDPNVIELIDAYPHKGNLHLVFEFMESDLEAVIRDRNIVLSPADIKSY
MQMTLKGLAYCHRKWVLHRDMKPNNLLIGSDGQLKLADFGLARIFGSPDRKFTHQVFARW
YRAPELLFGTKHYGAGVDVWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPSQW
PDMIYLPDYVEYQFVLAPPLRSLFPMASDDALDLISRMFTYDPKNRITVQQALEHRYFSS
VPAPTNPVLLPRPAAKGEAVNNIPRPPDLISQEGPVVLSPPRKARRVMLFPGSEGNAYED
GTLLKHSAVTSGNTGGSTTQSKYMPMSVDVDALFGSKPPPRPTISSTDRSHLKRKLDMEL
EFQDSPK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggatactagcttggaccagctccctgataaaagagttgcagctcgatatataaaa
ggagtgacccttggtgaagggacttatggcattgttttcaaagctctcgacactaagaca
aatcaaacagttgctatcaaaaaaattcgattggggaagcacaaggaaggcgtaaatgtt
actgcactaagggaaattaaattgctcaaggagcttaaagatcctaatgtaatcgagtta
atagatgcttatcctcacaaaggaaatctgcatcttgtctttgagttcatggagagtgat
cttgaagcagttattcgagatcgtaacattgtcctttctccagctgatataaaatcatat
atgcagatgacactcaagggccttgcttattgccatagaaaatgggtccttcacagggac
atgaaaccaaataacttattgataggatctgatgggcaattgaaacttgcagactttggt
ttagctcgcatatttgggagcccagaccgcaaattcactcaccaggtttttgcgcgatgg
tatagagcacccgagttgctttttgggaccaaacattatggagctggagtggatgtttgg
gctgctggttgtatatttgccgaacttctcctccgtcgaccttttcttcagggctcaagt
gatatcgaccagctagggaaaatctttgcagcctttgggactccaaagccatcccaatgg
cctgacatgatttaccttcctgattatgttgaatatcagtttgttcttgcaccaccactt
aggtctttgttcccaatggccagtgacgatgccttagatttgatctcaagaatgtttact
tatgatccaaaaaaccggatcacggtgcaacaagccctagagcacaggtatttttcttca
gtaccagcaccgacaaatccagtgttgcttccaagacctgcagcaaagggtgaagcagtt
aataatattccaaggcctcctgatcttatttcacaggaaggtccagtggtactctctcca
ccaaggaaggcaaggagggtcatgctttttcccggatctgaagggaatgcttatgaagat
gggacattattgaagcactctgcagtcacaagtggaaataccggtggttctacaactcaa
agcaaatacatgccaatgtctgtagatgtggatgctctttttgggtcaaaacctccacct
agacccactattagcagcacggacaggtcacatttgaagaggaaacttgatatggagctt
gaatttcaagattcccccaaataa
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