KEGG   Amborella trichopoda: 18445079
Entry
18445079          CDS       T02990                                 
Name
(RefSeq) cyclin-dependent kinase D-1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
atr  Amborella trichopoda
Pathway
atr03022  Basal transcription factors
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18445079
  09124 Replication and repair
   03420 Nucleotide excision repair
    18445079
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:atr01001]
    18445079
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18445079
   03019 Messenger RNA biogenesis [BR:atr03019]
    18445079
   03400 DNA repair and recombination proteins [BR:atr03400]
    18445079
Enzymes [BR:atr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     18445079
    2.7.11.23  [RNA-polymerase]-subunit kinase
     18445079
Protein kinases [BR:atr01001]
 Serine/threonine kinases: CMGC group
  CDK family
   18445079
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     18445079
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     18445079
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     18445079
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase DUF6193
Other DBs
NCBI-GeneID: 18445079
NCBI-ProteinID: XP_006855287
UniProt: U5D2U5
LinkDB
Position
Unknown
AA seq 427 aa
MADTSLDQLPDKRVAARYIKGVTLGEGTYGIVFKALDTKTNQTVAIKKIRLGKHKEGVNV
TALREIKLLKELKDPNVIELIDAYPHKGNLHLVFEFMESDLEAVIRDRNIVLSPADIKSY
MQMTLKGLAYCHRKWVLHRDMKPNNLLIGSDGQLKLADFGLARIFGSPDRKFTHQVFARW
YRAPELLFGTKHYGAGVDVWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPSQW
PDMIYLPDYVEYQFVLAPPLRSLFPMASDDALDLISRMFTYDPKNRITVQQALEHRYFSS
VPAPTNPVLLPRPAAKGEAVNNIPRPPDLISQEGPVVLSPPRKARRVMLFPGSEGNAYED
GTLLKHSAVTSGNTGGSTTQSKYMPMSVDVDALFGSKPPPRPTISSTDRSHLKRKLDMEL
EFQDSPK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggatactagcttggaccagctccctgataaaagagttgcagctcgatatataaaa
ggagtgacccttggtgaagggacttatggcattgttttcaaagctctcgacactaagaca
aatcaaacagttgctatcaaaaaaattcgattggggaagcacaaggaaggcgtaaatgtt
actgcactaagggaaattaaattgctcaaggagcttaaagatcctaatgtaatcgagtta
atagatgcttatcctcacaaaggaaatctgcatcttgtctttgagttcatggagagtgat
cttgaagcagttattcgagatcgtaacattgtcctttctccagctgatataaaatcatat
atgcagatgacactcaagggccttgcttattgccatagaaaatgggtccttcacagggac
atgaaaccaaataacttattgataggatctgatgggcaattgaaacttgcagactttggt
ttagctcgcatatttgggagcccagaccgcaaattcactcaccaggtttttgcgcgatgg
tatagagcacccgagttgctttttgggaccaaacattatggagctggagtggatgtttgg
gctgctggttgtatatttgccgaacttctcctccgtcgaccttttcttcagggctcaagt
gatatcgaccagctagggaaaatctttgcagcctttgggactccaaagccatcccaatgg
cctgacatgatttaccttcctgattatgttgaatatcagtttgttcttgcaccaccactt
aggtctttgttcccaatggccagtgacgatgccttagatttgatctcaagaatgtttact
tatgatccaaaaaaccggatcacggtgcaacaagccctagagcacaggtatttttcttca
gtaccagcaccgacaaatccagtgttgcttccaagacctgcagcaaagggtgaagcagtt
aataatattccaaggcctcctgatcttatttcacaggaaggtccagtggtactctctcca
ccaaggaaggcaaggagggtcatgctttttcccggatctgaagggaatgcttatgaagat
gggacattattgaagcactctgcagtcacaagtggaaataccggtggttctacaactcaa
agcaaatacatgccaatgtctgtagatgtggatgctctttttgggtcaaaacctccacct
agacccactattagcagcacggacaggtcacatttgaagaggaaacttgatatggagctt
gaatttcaagattcccccaaataa

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