Amborella trichopoda: 18445684
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Entry
18445684 CDS
T02990
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18445684
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
18445684
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
18445684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_3
Kelch_4
Kelch_6
Kelch_5
Kelch_2
MTS
PrmA
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
18445684
NCBI-ProteinID:
XP_006855879
UniProt:
U5CVJ2
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MEFEKRKGMALAALASELGDKSPKGSVDAPILLLLRTINAIPSYFTTSSCSGRISILLHP
HTITKKNKKKAGDWLFVSHEPANPEAVVRLLFDEQEREQDGGLVVFRFEPFILAVDCIDV
ASAQSLVSTAISCGFRESGITGIGRRIMVSIRCSIRLEVPLGQLGRLMVSSEYVRFLVGL
ANEKFEENKRRTDAFLQALHMKGSPGSADSKKDFHDRIQGYSSMTRSKFADLESKQTDIL
CEMSSSEKDIPAACAAEPPNMHMEDEDPYDYRKFSVGSILLSYHSEIEHCKLDREETGHD
SGSSNSLQHGLSVNELVISGELVEKLLLWGHSACVLDTTKFKQILVFGGFGGLGRHARQN
ESFTLDPKVGLLKKINVSGPPSPRIGHTLSVVGNHVFIIGGRGDPIQILDDVWVLHVDEN
RWEQLACSGSEFHARHRHAAAVVGSKIYVFGGLDCGRIYSSMFVLDTELLQWNEVCIKGE
LPCARHSHSMVAVSRKLYMFGGYDGERPLGDLYSFDVATSLWKKELTLGTNPSPRLSHCM
FVYKRYVGILGGCPLGYQYQKLALLDLNDLVWKHVKLQSINESLLIRSAACVVEDDLVII
GGGASCYAFGTKFNAPLKINLYKIGLLPCGSCDIGDKSNAKIDEKGHDSNTGISICHGDD
PLASHENDSMCKATKLSPVSYDAKFSDHTDIMAGSNSDNKCMKHWVLQIERAHAKFGKDI
LKNLGWLDLGRRVYSSKDGTQIYLPITKNCYPFLREKLMASAEGFDNWNGIYPKKLNSGK
ENFQSVDSLSILVNLLLSGGGSLTIDASPRARKAPKAPHHVLREEVCSLIKQKGLSPELL
DQLPSRWERFGDLLILPMDSFKDKVWDSIGEELWPIVMKSLEANRLARQGRISPTGTRDS
TVELLMGDNGWVEHQENGIIYTFDVTKCMFSSGNVSEKLRMAHLDCRNEVIVDLYAGIGY
FVLPFLVKAGAKLVYACEWNPHALEALRHNVRANHVADRCIILEGDNQITAPRGIANRVC
LGLLPTSESGWPTAVRALRPEGGVMHVHGNAKDVEEGSWSEHVVRSIKDIADSIGYCWDV
SIEHLERVKWYAPHIRHLVADVRCRQCNSYIL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagaggaagggcatggctttggcagccttggcttcagaattgggcgat
aaatcccctaaaggatcagtcgatgccccaatccttctcttgcttcgcaccatcaacgcc
attccctcctatttcaccacctcctcttgctctggtagaatctccatcctcctccaccct
cataccattacgaagaagaacaaaaagaaagcgggggattggttatttgtgagccacgag
cctgcaaatccggaagccgtagttcggctcttgttcgacgagcaagagagagagcaggat
ggagggcttgttgtgttcagatttgagccattcattctcgctgttgattgtattgatgta
gcctcggcccagtccctcgtctccacagccatctcttgtggtttcagagagtctggtata
acgggtattgggaggagaattatggtgtcaataagatgctccattcggttggaggtgcca
ttaggacaacttggtaggctcatggtttcgtcagagtatgtgagattcttagttggtctt
gctaatgagaaatttgaggagaataagaggaggactgatgctttccttcaggcgttacat
atgaaggggtcaccaggttcagctgacagtaagaaagattttcatgatagaatacaaggc
tactcctccatgacacgaagcaaatttgctgatcttgaatccaagcaaactgatatttta
tgtgaaatgagttcgtctgagaaagatatcccggctgcctgtgcagctgaacctccgaat
atgcatatggaagatgaagatccttatgattacaggaagttttcagtgggtagcatattg
ctgtcatatcattcagaaattgagcactgcaagttggatagagaagaaacaggacatgat
tctgggtcatccaattctcttcagcatggcctttcagtcaatgaactggtgatctctggt
gaactggttgagaagcttctcctttggggccattctgcttgtgtattagatactacaaag
tttaagcaaatcctggtttttggtggatttggaggtttagggcgacatgctcgccaaaat
gagtctttcactctagaccctaaagtaggcttgttaaaaaagataaatgtatcaggccca
ccatctccacgcatcggtcacacattgtcagttgttggaaaccacgtatttattattgga
ggccgaggtgatccaatacaaattcttgatgatgtatgggtccttcatgtagatgaaaat
agatgggaacagttagcttgttctggtagtgagttccatgcgaggcatcggcatgcggct
gcagttgtgggttcaaaaatatatgtttttggtggtcttgactgtggaaggatatacagc
agcatgtttgttttagacacagaattgttgcaatggaatgaggtgtgtatcaaaggggaa
ttgccttgtgcccgccattcacattcgatggtggctgtcagtcgcaagttatatatgttt
gggggttatgatggtgagagacccttaggggacctatacagttttgatgttgccacttct
ctgtggaagaaagagctgacattgggaacaaatccatccccaagactttcacattgcatg
tttgtctataaaaggtatgttggcatattggggggatgccctctcggataccaataccag
aagttagcgttactcgatctgaatgatctagtttggaagcatgttaagctacaatctatc
aatgaatctcttctgattcgtagtgcagcttgtgttgttgaagatgatcttgtcattatt
ggtggcggtgcatcttgttatgcattcggaacaaagtttaatgctccattgaagataaat
ttgtacaagataggtttgttaccttgtggttcttgtgatataggagacaaatccaatgca
aaaattgatgagaaagggcacgacagtaataccggtatttccatttgtcatggagatgat
ccgctggcatcacatgagaatgattcaatgtgtaaggctaccaaattgagtcctgtatct
tatgatgctaaattcagtgaccacacagacataatggctgggagcaatagtgataacaag
tgtatgaaacactgggttctgcagattgaaagagcacatgctaaatttggaaaggatata
ttaaaaaatttagggtggttggatcttgggagaagggtgtattcaagcaaggatggaaca
caaatttatttaccaataacgaaaaactgctacccctttcttcgagagaaattaatggct
tctgctgaaggatttgataactggaatggcatttatccaaaaaaactgaattcaggaaag
gaaaattttcaatcggttgattctttatcaatattagtcaatcttctgttatctggtggt
ggctccctaactattgatgccagtcctcgtgctcgaaaggcacccaaagctcctcaccat
gtattgagagaagaagtttgttcattgataaagcagaaaggcctttctccagagctgctg
gatcagttgcccagcaggtgggagagattcggggatttgttaatacttcccatggattct
tttaaggataaggtttgggattctatcggggaggagctttggccaattgttatgaaatca
cttgaagcaaatcgtcttgctcgtcagggtcgaatttctcccactgggacaagggatagt
actgtagagctccttatgggagataatggctgggttgagcatcaagaaaatggcataatc
tatacttttgatgtgacaaagtgcatgttttcttcgggtaacgtctctgagaagcttcgg
atggcccatcttgactgtaggaacgaagtaattgtcgacttgtatgctggaattggctac
tttgtgcttcctttccttgttaaggccggagcaaaactggtttatgcttgtgagtggaac
cctcatgcgttggaggctctacgtcacaatgtccgagccaatcatgtagccgataggtgt
atcattcttgaaggagataatcagatcacagcacccagaggaatagctaatcgtgtttgc
cttggtctccttccaaccagtgaaagtggttggccaactgcggtgagggcattgaggcct
gagggcggtgtaatgcatgtgcatggaaatgccaaagatgtagaggagggctcatggtca
gaacatgtagtaagatcaataaaggacattgctgattctataggttattgctgggatgtt
tcaattgagcatctggagcgtgtgaagtggtacgcaccacacattcgacatcttgtagca
gatgtgaggtgtcgccaatgtaattcctacattttatag
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