Amyelois transitella (navel orangeworm): 106129620
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Entry
106129620 CDS
T09957
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03022
Basal transcription factors
atra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106129620
09124 Replication and repair
03420 Nucleotide excision repair
106129620
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atra01001
]
106129620
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
106129620
03019 Messenger RNA biogenesis [BR:
atra03019
]
106129620
03400 DNA repair and recombination proteins [BR:
atra03400
]
106129620
Enzymes [BR:
atra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
106129620
2.7.11.23 [RNA-polymerase]-subunit kinase
106129620
Protein kinases [BR:
atra01001
]
Serine/threonine kinases: CMGC group
CDK family
106129620
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106129620
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
106129620
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106129620
BRITE hierarchy
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
Pkinase_fungal
FTA2
Motif
Other DBs
NCBI-GeneID:
106129620
NCBI-ProteinID:
XP_013183676
EnsemblRapid:
LOC106129620
LinkDB
All DBs
Position
16:complement(join(6210856..6210997,6211529..6211701,6212147..6212324,6212577..6212742,6213259..6213393,6217662..6217830,6218478..6218531))
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AA seq
338 aa
AA seq
DB search
MDEPTLRYEKIDFLGEGQFATVYKARDVKTDKIVAVKKIKIGSRLEAQDGINRTALREIK
LLQELQHINLIGLLDVFGQKSNVSLVFDFMDTDLEIIVKDNNIVLTPANVKAYMIMTLKG
LEYLHQNWILHRDLKPNNLLINREGILKIGDFGLAKAFGSPTRINTHQVVTRWYRSPELL
FGARQYGTGVDMWAIGCILAELLLRVPFLPGESDLDQLTRIFQVFGTPTEEIWPGMKSLT
DYVQFKQFPPQQLRHIFTAASDDLLQLLDSLLSLYPPKRCDCTQALQMPYFSNKPAPTMG
SKLPMPSSITRMEAEKPSLKRKLLENIDGGSLAKRLQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccaaccttacgctatgaaaaaatcgactttcttggagaaggccagtttgca
acagtgtacaaagctagagatgtcaaaactgataaaatagttgctgtaaagaagataaaa
atagggtctcgtttagaggctcaagatggaatcaacaggacagctttaagagaaattaag
ttgctgcaagaactacaacatattaacttgatcggacttttagatgtatttggacaaaaa
tcaaatgtttctttagtatttgattttatggacactgacttagaaataattgtgaaggac
aacaatattgtacttacccctgctaatgttaaggcatacatgattatgactttaaaaggt
ttagaatatttacaccaaaactggatattgcacagagacttaaaaccaaataacttgcta
ataaatagagagggaatactgaaaattggagatttcgggctcgccaaagcatttggatct
cccactagaataaatacccatcaagttgtaacaaggtggtatagatctccagagttatta
tttggagccaggcagtatgggacaggagttgacatgtgggctattggttgcatactggca
gaacttcttttgagagtcccttttctgccaggagaatctgatttggatcagttgacacgc
atttttcaagtatttggcacacccacagaagagatttggcctggtatgaaaagtttaacg
gactacgtccagttcaagcagtttcctccccagcaactgcggcatatattcaccgcggct
tccgatgacctcctgcaacttctggacagcctcctctctctctacccgcccaagaggtgt
gactgcacgcaagcgctacagatgccatattttagtaataaaccagcacccacaatgggt
tcaaaattaccgatgccttccagcataacaagaatggaggcggagaaaccatcgctcaaa
aggaaacttctggaaaacattgatggaggctccttagcaaagagactacaattctag
DBGET
integrated database retrieval system