KEGG   Amyelois transitella (navel orangeworm): 106129932
Entry
106129932         CDS       T09957                                 
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03440  Homologous recombination
atra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106129932
   03460 Fanconi anemia pathway
    106129932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atra03400]
    106129932
Enzymes [BR:atra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     106129932
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     106129932
   FA (Fanconi anemia) pathway
    Downstream FA components
     106129932
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII PhoH
Other DBs
NCBI-GeneID: 106129932
NCBI-ProteinID: XP_060806626
EnsemblRapid: LOC106129932
LinkDB
Position
22:join(5707974..5708444,5709096..5709207,5744625..5744756,5749339..5749422,5755773..5755929,5756482..5756731,5757163..5757378,5757885..5758004,5758514..5758608,5759550..5759677,5760015..5760128,5760854..5760972,5761995..5762186,5762430..5762614,5763268..5763361,5763870..5763983,5764626..5764750,5765417..5765543,5765946..5766047)
AA seq 978 aa
MSSIYEISDDDDSFSEPQNLGKKELSSGETTVILSDEENAEISILTEEIFSSDDEVLPVV
ELRNRRAEVVKKLFPTNNLRDKPKQNQSSHPLKFKDLTPKPNYSYDSNKKVDSLPGPSTS
FMSPMKPKKPGYDKMIGGVTVNMPVEPYGCQIALMSKVITAIKTKQNCLLESPTGTGKTL
ALLCSALAWQHSESSRLAALTAQEYFSRHPELGLVEGAATVIGSPEKVPFENFTRTVFGE
KSIYDKPNETYGRGGGDGAQTQWFQKESPTDMVKIHPKRQKLNPEGEGSSTPLKCKFTPP
TTPTKTVEQPAPETPQQVRHLYSLISRLQLWTSTLVYCSTPTIYYGARTHKQLQQVIKEF
KRTSYCGDAKMSLLSSREYSCIREYDRAQWTSKNDMCRECIKTSSKGDSNCKYYDNREAL
DHEKLPPAFDLEDLVNAGHEKAACPYFAAKIMARFAQIVFCPYNYLIEPSIRSSMQIDLR
NNILIIDEAHNIEDICRDAASLSFSRDHVLNALKELDKVSEYRYQNKENQDYVEKLVKTL
RNWDYWFTNQSQLLAGKAVNNNEVDHIWQPEHFIQTLNNHNIGPKQYPEFKQTASLFCQK
LREDPRTLLGVTQATGSLIESIDTVFGYLFRSDGKYTADFTPALVKTVVMENSYEAGLWR
RTNYAQKVAKETLELRLMCMNSGIVFEGLKAARCIILASGTLTPLLSLYSELATDFPLKV
SPNHVIPKERVWVGTLTTCPDGQPLQCKSTDTSQVAVQDALGAAVTWVCRVTPHGVLCFL
PSYRLMDQLVKRWRENGTWDKLRQLKNVFMESRNVKDHNEVMEDYYNSVETDKGAILFAV
FRGKVSEGMDFKDQQARAVITVGIPYPNMYDRAVQAKVNYNDKFSKTRDLLPRSEWLLVQ
AYRALNQAVGRCVRHRGDWGAVLLVDARFREPHYTQHLSGWVRNLLGNNHFTFNGLVNSA
NSLESFMQNMTLGEIEDI
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgtcttccatatacgagatttcagatgatgacgatagtttcagtgaacctcaaaatctt
gggaaaaaggaattatcaagtggtgaaacgactgtcatacttagtgatgaagaaaacgcc
gaaatatcaattttaacagaagaaatcttttcttctgacgatgaggtcttacctgtcgtt
gaattgagaaaccgaagagccgaagttgtaaagaaattatttcccacaaacaatttaaga
gataagccaaaacaaaatcaaagttctcaccctttaaagttcaaggatctcactcccaaa
ccaaattattcatatgattcaaacaaaaaagttgattctttacctggaccatctacatca
tttatgtctccgatgaagcctaagaagcctggatatgacaaaatgattggtggtgtgaca
gtcaatatgcctgttgaaccctatgggtgccaaatagctcttatgtccaaggtgataact
gcaataaaaacgaaacaaaactgcttactggagagcccaacagggaccgggaaaacttta
gctctgctgtgtagcgctttagcctggcaacactcggaaagcagtcggctagccgcgttg
acggcgcaagagtacttctctcgccatcccgagctgggcttggtggaaggagccgctacg
gtaatcggaagcccagaaaaggtgcccttcgagaacttcaccaggactgtgttcggtgaa
aaaagcatttacgacaaacccaacgagacgtatggacgtggcggcggtgacggtgcgcaa
actcaatggttccaaaaagagtctccaacggacatggttaaaatacacccgaaacgacag
aagctgaatcctgagggcgaaggatcaagcaccccgctcaaatgcaagttcactccgccg
accacgccgaccaaaactgtcgaacaaccggcgccggagacaccgcaacaagttagacat
ctgtacagcctgatttcacgtctgcaactctggacaagcacccttgtttattgcagcacc
cccaccatctactacggcgcgaggactcacaaacagctccaacaagtcataaaggagttt
aagaggacctcgtactgtggggatgcgaagatgagtctactgtctagtagagagtatagc
tgcataagagagtacgaccgcgcgcagtggacctctaagaatgatatgtgcagggaatgt
atcaagacgtcttcaaaaggcgatagcaactgtaagtactacgacaaccgtgaagctctt
gaccacgagaaactcccaccggccttcgacctggaggacctggtcaacgctggccacgag
aaagcggcgtgtccatacttcgcagccaagattatggccagattcgcgcaaatcgtcttc
tgcccgtacaattatctaatcgagccgagtattagaagtagtatgcaaatcgatttgagg
aacaacatactgataatagacgaggctcataatatagaggacatctgccgcgacgccgcc
tctctaagcttctccagggaccacgtgctaaacgctttgaaggaactggataaagtgtcc
gaatatagataccagaacaaagaaaatcaggattatgtggagaaacttgtgaagactctc
agaaattgggattactggtttacgaaccagtctcaactgctggctggcaaagccgtgaac
aacaacgaggtggaccacatctggcagccggagcatttcatccagaccctgaacaaccac
aacatcggccccaagcagtatccagaatttaagcagaccgcttcattattctgccagaag
cttcgagaagatcccagaacactactcggcgtgacacaagcgacggggtcccttatagaa
tccatagacacagtgtttggttacctgttccgcagcgatggtaaatataccgcggacttt
actccagcgctggtgaagactgtcgtcatggagaattcttatgaggcggggctgtggagg
cggaccaactatgctcagaaggtagccaaagagacgctagagctccgtctcatgtgcatg
aactccggcatcgtgttcgagggcctgaaggcggctcgctgcatcatcctcgcgtcgggg
accttgaccccgctactcagcttgtactccgagttagccacagatttcccgctcaaagtc
agccccaaccatgtcataccgaaggaaagggtgtgggtgggcaccctaaccacctgtcca
gatggtcagcccctccaatgtaagagtaccgacacgtctcaagtggcggtgcaggatgca
ctgggcgcggccgtcacatgggtgtgcagagtgaccccgcatggcgtgctgtgcttccta
ccttcgtacagattgatggatcagctcgttaaaaggtggcgtgagaacggcacgtgggac
aagctacgccagttgaaaaatgttttcatggagagtaggaacgtaaaggaccacaacgag
gttatggaggattattacaatagcgtggagacggacaagggcgccattttgttcgccgtg
ttccgcgggaaggtatcggagggtatggatttcaaggatcagcaggccagagctgtgatc
acggtgggcatcccgtacccgaacatgtacgaccgagcagtgcaggctaaagtgaactat
aacgacaagttctcgaagaccagggacctgttgccgaggagcgagtggcttctggtgcag
gcttatagagccctgaaccaagcagtggggcgctgcgtgcggcaccgcggcgactggggc
gccgtgctgctggtggacgcgcgcttccgggagccccactacacgcagcacctctcgggg
tgggtgcgcaacctgctgggcaacaaccacttcacattcaacggtctagtcaacagtgcc
aacagtctggaatccttcatgcagaacatgactctaggagaaatcgaggacatctga

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