Amyelois transitella (navel orangeworm): 106130564
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Entry
106130564 CDS
T09957
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03020
RNA polymerase
atra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106130564
09124 Replication and repair
03420 Nucleotide excision repair
106130564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
106130564
03400 DNA repair and recombination proteins [BR:
atra03400
]
106130564
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106130564
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106130564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
106130564
NCBI-ProteinID:
XP_013184888
EnsemblRapid:
LOC106130564
LinkDB
All DBs
Position
18:5920238..5921065
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPSVHITELTDDNVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVDKIRYSRDCMCADFCSDCSVEFTLDVKCTGEQTRHVTTADL
KSSDPRVVPVTSRHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNSMRHTLYPKPDEWPKSEHTELDEDQYEATFNWEAKPNKFFYNVESAGALK
PENIVLMGIVVLKNKLLNLQVQLAQEAQNDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgccaatcaaccttctgtgcatattaccgagttaactgacgacaatgtgaaa
tttgtagttgaagatacagagctaagcgtcgctaatagcatgcgtcgcgtttttatcgca
gagacaccaacgatggctatcgactgggtgcaactagaggccaattccactgtgctcagt
gatgagttcttagcgcatcgaatagggctcataccgctaatatcggacgatgtagttgat
aaaatccggtattcaagggattgtatgtgtgcagacttttgttctgactgcagtgttgag
tttacgctggatgtgaaatgtactggtgaacaaaccaggcatgtgacaacagcagatctt
aaatctagcgacccaagagttgttccagttacttcaaggcacagagatgaagatcaggct
gattatggcgaggccgatgaaattcttattataaaattacgcaaaggacaagagttaaag
ttacgagcatatgctaagaaaggatttggcaaagagcatgcaaagtggaatccaactgct
ggtgtttcatttgaatatgaccctgataattccatgagacatacattgtatcctaagcct
gatgagtggccaaaaagtgagcacacagaactggatgaggaccagtatgaagctacattc
aactgggaggctaaacctaataagttcttctacaatgtggagtctgctggagctttgaag
ccagagaatatagttctaatgggtatagtggtactgaagaataagcttctgaatctgcag
gtgcagctggcacaagaagcacagaatgatgcacttgctatcaattaa
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integrated database retrieval system
