KEGG   Amyelois transitella (navel orangeworm): 106131517
Entry
106131517         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03020  RNA polymerase
atra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106131517
  09124 Replication and repair
   03420 Nucleotide excision repair
    106131517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106131517
   03400 DNA repair and recombination proteins [BR:atra03400]
    106131517
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106131517
  RNA polymerase III system
   RNA polymerase III
     106131517
  RNA polymerase I system
   RNA polymerase I
     106131517
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106131517
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 106131517
NCBI-ProteinID: XP_013186086
EnsemblRapid: LOC106131517
LinkDB
Position
20:complement(join(5046899..5047086,5048133..5048343))
AA seq 132 aa
MADEEYEAEDAGADYDDIAEEDDNIEETEEQEEDGYNTQFLAPGQGGGGVEKHKRITTRY
MTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKQRKIPIIIRRYLPDHSYE
DWSIDELIIIDH
NT seq 399 nt   +upstreamnt  +downstreamnt
atggccgatgaggaatacgaggcagaagatgcgggtgcagactacgacgatattgcagag
gaggatgataatattgaagaaacggaagagcaggaagaagacgggtacaacacccagttt
ttagcaccagggcaaggcggtggtggagtagagaaacacaaaagaatcactactcgttat
atgactaaatatgagcgcgccagagttttaggtacaagagcattgcaaattgctatgtgt
gctcctgtaatggtggagttagaaggagagacagatcctcttcagatagccatgaaagaa
ttgaagcaacgcaagatcccaatcattatccggaggtacctacctgaccactcatatgaa
gactggagcattgatgaactcattataatagaccattag

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