KEGG   Amyelois transitella (navel orangeworm): 106133049
Entry
106133049         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106133049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106133049
Enzymes [BR:atra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106133049
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     106133049
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 106133049
NCBI-ProteinID: XP_060807019
EnsemblRapid: LOC106133049
LinkDB
Position
23:join(1703513..1703599,1703709..1704038,1704459..1704551,1704927..1705073,1705977..1706149,1707021..1707270,1709232..1709387,1710139..1710305,1711979..1712126,1713346..1713406,1714177..1714376,1714945..1715098,1716549..1716639,1717199..1717394,1719626..1719840,1720355..1720493,1720909..1721115,1722012..1722215,1722837..1723001,1725203..1725400)
AA seq 1126 aa
MKGKKSEQKPSLAYTGSKDYSKPPKIANPLLQCLGAPHIDSFNYMLQDGLKIAIEDLLPA
HFEGPNGEKVKITIDDAAFSKPSVPIDVVGVKNQQVWPTECRQRAATYRGDFKIRMTVSV
DGKSVSVDKSMGSLPIMVKSKMCHLADLSPEELIQHNEHADEWGGYFVVKGHERLARMLL
VTRRNYPVAIKRPSWKMRGNLFSEYGILVRCVKSDQTSTNNVLHFLQNGTCKLMFSHRKV
MYYAPLLLILKCLVDWPDHYIYRLLLNGKKDDLYYMNCIQNMLRELHEEGLHTSSECRSY
LGRMFRQRLFELPPWATDEDAADFLLDRCVMIHLKSHKDKSYSLLFMAQKLFDLVQNKCK
VEGADAVMMQELLLGGHLYLQVLKERLQATIDVVRLQLVRKANAAKKVTLTPTQIPDLLR
MAGKLDAKMETFLATGNAPSNNVALPQHKGLTIVAENINRMRYMSHFKAIHRGSFFMEMR
TTEARQLLPDAWGFVCPVHTPDGAPCGLLNHLTMHCQVTQCPDPNQLANLPLVLKKYGMQ
PISSVTQNPISHDVYKYPVFLDGRLLGYFSEDTAADAMAFLRTLKVKGEEIPITTEIVFV
PKKQISAQYPGIFLFTTEARMMRSVINLATGALELIGTMEQLYLDVAVTQSEIIKGKTTH
LELSKSAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWATNAETKLYRLQTPA
TPLFRPTHYDHIGLDDYPMGTNAIVAVISYTGYDMEDAMIINKSSYERGFAAGTVYKSEF
VELKTSSSFFQRDPNKPELVEFMDEDGLPAVGARIQPDSPFYCYFDGDKSQYVVHKYRGK
EEVFVDSVRLCGDFSTRSPPTACIMLRIQRNPSVGDKFASRAGQKGICSQRWAAEDLPFT
ESGLIPDVMFNPHGFPSRMTIAMMIECMAGKAGSLHGHVHDATPFRFTEKDTAINYFGRL
LEAGGYNYYGTERMYSGVDGREMTADIFFGVIHYQRLRHMVSDKWQVRTTGMVDAMTRQP
VKGRRRGGGVRLGEMERDALLSHGAAFLLQDRLFHCSDKSQAVLCIKCGSLLGPIVGRTE
GECCRLCSGELATVSIPYIFKFFVTQLASVNIHVKIKCNQQLAITC
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgaaaggaaaaaagagtgaacaaaagccttcacttgcttacacgggcagtaaagactat
agtaagccgcctaaaatagcaaacccgcttttacaatgcctcggagcaccacatatagac
tcattcaactacatgcttcaagatgggttgaaaattgccatcgaagacttattgcctgca
cattttgaaggtcccaatggtgaaaaggttaaaataactatagacgatgctgcattttcg
aaacccagtgttccaattgatgtggtgggtgttaaaaaccagcaggtttggcccactgag
tgtaggcaaagggccgctacatacaggggtgattttaaaataagaatgactgtgagtgtt
gatgggaaatccgtttcggtggacaagtctatgggaagcctgcctattatggttaagtcc
aagatgtgccacctagcagacctgtcgccggaagagctgatccagcacaatgaacatgca
gacgagtgggggggatattttgtggtcaagggtcacgagcggctagcgagaatgttgctt
gtcaccaggaggaactacccggtggccatcaagcggccatcttggaaaatgagaggaaac
ctgttctcggaatacggcatactggttcggtgcgtgaagagtgatcagactagcactaac
aacgtcctacattttctacaaaacggcacttgtaagctgatgttctctcatcgcaaagtg
atgtactacgcgcctctacttctaatattgaagtgcttggtggactggcctgaccattat
atttacaggctgctgttgaacgggaagaaggatgatctgtattatatgaattgcatccag
aacatgctccgggaacttcatgaggaaggtctccatacttcatcggagtgtcgttcgtac
ctcggcaggatgttcagacaacgactcttcgagttaccaccctgggctactgatgaggac
gccgcagacttcctcctggatcgctgtgtgatgatacatttgaagagtcataaggataaa
tcctattcgttgctgttcatggcgcagaagctgtttgatttggtgcagaataagtgcaag
gtggaaggcgcggacgcggtgatgatgcaggagttgctgctgggcggccacctgtacctg
caggtgctgaaggagcggcttcaggccaccatcgacgtggtgaggctgcagctggtgagg
aaggccaacgctgcgaagaaggtcacgctgactcctactcaaatccccgacctacttcgc
atggcgggcaagttggacgccaaaatggagacattcctggcgacgggcaatgcgccctcc
aacaacgtggcgctgccgcagcacaaggggctcaccatcgtggcggagaacatcaaccgc
atgcggtacatgtcgcatttcaaggccatccaccgcgggtcattcttcatggagatgcga
acgacggaggcccgccagttgctgccagacgcatggggctttgtctgccccgtacacact
ccggacggtgcgccgtgcggactgctcaaccatctcactatgcattgccaggttacacag
tgtcctgatccgaatcaactagccaatctaccgctcgtcctcaaaaaatatggtatgcag
ccgatcagttctgtcacccagaatcctatcagccacgacgtgtacaaatacccagtgttc
ctggacggcagacttctcggctacttctccgaggacacggctgctgatgccatggccttc
ctccgaacactgaaggtgaaaggcgaggagataccaataacaacggaaattgtgttcgtg
cctaaaaaacagatatccgcccaataccctggtatattcctgttcacgacggaagctcgc
atgatgagatccgtcatcaacctggccactggagccctggagctgatcggcaccatggaa
cagctgtacctggacgtggctgtcacccagtcggaaattatcaaaggaaaaacaacgcat
ctggagttgtcaaaatctgcattcatgagtaacttggctcagttggtgcccatgccggat
tgtaaccagtcaccaagaaatatgtaccaatgtcagatgggtaaacaaactatgggtaca
cccatccacacgtgggctacgaacgctgaaaccaagctgtacaggctacagacccctgcc
acgcctctgttcagacccacacactacgaccatataggattggacgactatcccatggga
actaacgctattgtcgctgttatatcgtacacgggctacgacatggaagacgcgatgata
atcaacaagtcatcatacgagcgtggtttcgccgccggcacagtttacaaatcagagttc
gttgaactcaagaccagttcatcatttttccaaagggatcccaacaagcctgaactagtt
gagtttatggatgaagatgggttaccggcggtcggagcgaggatacaacctgacagtccg
ttctattgctacttcgacggcgacaagagtcagtacgtggtacacaaataccgcggcaaa
gaagaggtgtttgtcgacagcgtgaggctctgcggcgacttctccactcgctcgccgccc
actgcctgcatcatgctgagaatacagcgcaacccgtcggtgggtgacaagttcgcgtcc
cgcgccggccagaagggcatctgctcccagcggtgggcggccgaggacctgccgttcacg
gagtcggggctgatccccgacgtgatgttcaaccctcatgggttcccctcgcggatgacc
atcgctatgatgatagagtgcatggccggcaaggcgggtagtctacacggtcatgtccac
gatgcaacaccgttccgtttcacagagaaagatacagctatcaattacttcggtcggttg
ctcgaagcgggcgggtacaattactacggaacggaacgtatgtacagcggcgtcgacggc
agggaaatgacggcggacatctttttcggtgtcatacactaccagagactaaggcacatg
gtgtcggataagtggcaggtccgtacaacgggcatggtggacgcgatgacccgtcagccc
gtcaaaggcagaagacgtggcggcggagtgcgcctcggggagatggagagagacgccttg
ctctcacacggcgccgctttcctactgcaggacagactgttccattgctctgataagagt
caggctgtgctgtgcataaaatgcggttctctcctcgggccgatagtgggacgcactgaa
ggggaatgctgccgcctgtgctccggcgagctggcgaccgtctccataccctacatcttc
aagttcttcgtcacccagttggcctccgtgaacattcatgtcaagatcaaatgcaatcaa
cagttggctatcacttgttag

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