Amaranthus tricolor (tampala): 130800640
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Entry
130800640 CDS
T09367
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130800640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130800640
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130800640
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130800640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
Other DBs
NCBI-GeneID:
130800640
NCBI-ProteinID:
XP_057520184
LinkDB
All DBs
Position
15:11641993..11667061
Genome browser
AA seq
1168 aa
AA seq
DB search
MAKNADIEALRELFQHHIESYDYLVETGLEKIMNSIKPVEIRHPFSSTKLRIYFENPSLI
APVKSDKGMARPLLPHECRQAKISYSTKLKADVCFQYNNGVVIRENYNFGSFPVMLKSKI
CHLRNASPTKLVEHKEESTEMGGYFILNGLERIIRLLILQKRNYPMSMVRSSFRGRREGY
SDRALAMRCVREDQSSVTLKLYYLNNGSARIGFWIQAREFLLPVGIVLKALIPATDHEIY
VALTCIYNEKYEGLKGAVGTQLVGERAKVIVDELHKLGLLTHRQCLEHIGQCFQPVMDGL
ENENYSVIGDAVLNDFIFVHLGSNNHDKFNLLIFMLQKLFSLVDKTSVSDNPDALQNQEV
LQAGLLISVYLKEKLQEWLHRSRKILNDELNQNCEKFDFTSLGDVKKLLNKNAAAQVGNA
IENMLKTGRIATQSTLDLPQKAGFTIQADRLNFLRFLSNFRAVHRGAAFAGARTTSVRKL
LPEAWGFLCPVHTPDGEPCGLLNHLTHTCRITSFFDQQGVIKDFFKMRLSIIKVLIGVGM
KPSLPMLAQGGPPEVLSVLLDGRVVGSIACSEVEELVKCLRRLKLSDTKMVPNDLEVGYV
PLSFRGAYPGLYLSTNPNRFIRPVKNISVPPEDGNVIELIGPFEQVYMEIRCPDGGDGGR
GESHPATHEEIHPTGILSVVANLTPWSNHNQSPRNMYQCQMAKQTMGFSWQSLLFRSDQK
TYHLQTPQSPIVRTSSYAKYGIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH
AQIYQTETIDLTTEGSRSDRASKSFRRSTVDKSAHSLIDVDGLPYPGQIIHPNEPYCSVH
NSTNDTIFNKKLKGSEHAVVDSVVIDGKNKKGLQKANVRFRRPRNPIIGDKFSSRHGQKG
VCSRLWPDVDMPFSHNTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLAGKFRDATTF
GDTVKKADGEHGSESSSLVDELGSLLTARGFDRYGTEILYSGVYGTELTCEIFIGPVYYQ
RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHK
SSDYHVADVCSLCGSILSTVIIEPHKPVVHKINGLPPARAPKKVFCHACKTSKGMETVAM
PYVFRYLSAELAAMNIKMTLQLSNEAGA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaatgcagacattgaagctttgagagagctttttcagcaccatatagaatca
tatgactatttagttgaaacgggtttggaaaaaattatgaattcaattaagcccgtcgaa
attcgtcatccttttagctcaacaaaattgagaatttatttcgaaaatccgtcgttgatt
gctcctgttaagagtgacaagggaatggcaagacccttacttccacatgagtgtcgtcaa
gcaaagatttcatattccactaagttgaaagccgatgtttgctttcagtataataatgga
gttgttattagggaaaattataattttgggagctttcctgttatgttgaagtccaagatc
tgccacctcaggaatgcatcccctacaaaattagtggaacacaaagaggagtcaacagag
atgggcgggtatttcatcctaaacgggcttgagagaattattcgactattaatactgcag
aaacggaactatccaatgagcatggttcggagttcttttcgcggtcgtagagaaggatat
agtgatagagcacttgctatgagatgtgttagagaagaccagtcttccgtaactttgaaa
ctgtattatcttaataatggaagtgctagaatcggtttctggatacaagcaagggaattt
cttcttcctgtgggcattgtgctaaaggcacttattccggcgactgatcatgaaatatat
gtggctttaacatgtatttacaatgagaagtatgaaggactaaaaggtgctgttggcaca
cagcttgttggagaaagagctaaagttattgttgatgagcttcataaattagggcttttg
acccatcgtcaatgtcttgaacatattggacaatgcttccaacctgtcatggatgggcta
gaaaatgagaactattcagttattggagatgccgtgctaaatgatttcatatttgttcac
cttggttctaacaatcatgacaagttcaaccttctaatattcatgctgcagaaactgttt
tcgttggttgataagacttctgtttctgataatcctgacgctttgcaaaatcaagaagtt
ttgcaagctggtctattaatctcggtttatctgaaggaaaaattacaagaatggcttcat
agatcaaggaagattcttaatgatgagttgaaccaaaattgcgaaaaatttgatttcacc
agtcttggagatgtcaagaagttgttgaataaaaatgcagcagctcaagttggcaatgct
attgaaaatatgctgaaaactggaagaattgccacacagtctactcttgacctgccacag
aaagcaggctttacaattcaagctgataggcttaactttttacgttttctttcaaatttt
cgagctgttcatcgaggtgctgcttttgctggggctcgaactactagtgtgcgaaagctg
cttcctgaggcatggggttttctctgtcctgtgcacacgcctgatggagagccttgtgga
ttgctgaatcacttgacacatacatgtagaataacttccttctttgatcaacaaggagta
attaaggatttcttcaaaatgcgattgtctatcatcaaagtcttgattggagtgggaatg
aaaccctcattgccaatgcttgcccaaggtggccctcctgaagttctttctgtccttctt
gatggtcgagtagttggatccatagcttgtagtgaagttgaagaactagtcaaatgcttg
cggagactaaagctgtcggatactaaaatggttcctaacgatttggaggtgggctatgtg
cctttgagctttcgaggagcttatcctggattatacctttctacaaatcccaatcgattt
attcgtccagttaaaaatatctctgttcctcctgaggatggtaatgttattgaacttatc
ggcccatttgagcaggtgtatatggaaattagatgtcctgatggtggagatggagggagg
ggagaaagtcatcccgcaacacatgaggaaatacatccaacaggaatattgagtgttgtt
gctaatcttacaccttggtctaatcacaatcagagcccacgtaatatgtaccaatgccag
atggcaaaacaaactatgggcttctcttggcaatcattattgtttcgttcggatcaaaag
acgtatcatcttcagactcctcaaagtccaattgtgcgtacaagttcctatgctaagtat
ggtattgatgaatatccttcagggactaacgcaattgtagctgttctggcttatactgga
tatgatatggaagatgctatgattttaaacaaatcttctgttgagcgtggaatgtgtcat
gcccagatatatcagacagaaactattgatttgactacagaaggcagtagatctgatcgt
gccagcaaatcatttcgaagaagtactgttgataaatcagcacattctttgatcgatgta
gatggactaccctaccctgggcagataatacatcctaatgaaccatactgcagtgtccac
aatagcacaaatgatacaatctttaataaaaaattaaagggttcagaacatgccgtagtt
gattctgtggtcattgatgggaagaacaagaaaggacttcagaaggctaatgttcggttc
cgccgtccaaggaatccgattattggggataaatttagcagtaggcatgggcaaaaaggt
gtttgctctcgattgtggccagatgttgatatgccattttcacacaacactggcatgcgc
ccagatctaatcatcaatccgcatgcttttccttcgaggatgacaattgcaatgctttta
gaatccattgctgccaagggtggctctttagctggaaagtttcgcgatgcaacaacattt
ggagacactgtcaagaaggctgatggagagcatggatctgaatcaagttcacttgttgat
gaacttggctccttgttaactgctcgaggatttgatagatatggcacagaaatcctttat
agtggagtttatggaacagaattaacatgcgagatctttattgggcctgtttattatcaa
cgtttacggcacatggtttcagacaagtttcaggttcgttcaactggaactgttgatcca
gttactcgtcagcctataaagggtagaaagagaggtggaggtattcgatttggtgaaatg
gaaagagatgcgatgcttgcccatggcgctgcatatctattgcacgacagattacataaa
agctctgattatcacgttgctgatgtgtgctctctttgtggaagcattctctcaacggta
ataattgaacctcacaagccagtggtgcataaaatcaatggtctacctcctgcaagggct
cccaaaaaggtattctgccatgcttgcaaaactagcaaagggatggaaacggttgccatg
ccatatgtattcagatatctatctgccgaattggctgcaatgaatataaagatgaccctc
caacttagtaatgaagctggagcatga
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