Amaranthus tricolor (tampala): 130802088
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Entry
130802088 CDS
T09367
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130802088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130802088
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130802088
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130802088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
130802088
NCBI-ProteinID:
XP_057521976
LinkDB
All DBs
Position
2:complement(37908066..37933893)
Genome browser
AA seq
1150 aa
AA seq
DB search
MGLTRDSLPDSENTTNIMNKQSLTAPIKSTVDKYKLIPEFLKTRGLVKEHLDSYNYFVTT
GIKKIVQVNHEIRSSVDTGIYLKFKDVKIGEPSFVADGVAEKINPHQCRLSNLTYAAPIE
VHIEYVTDSGGEKERREKKDVVLGKMPVMLRSRCCVLNGKDETELAKLGECPLDPGGYFI
VKGTEKVIMIQEQLSNNRIIIEIDKKGNLVASVTSSTATLRSKTVIVMEKEKIYLQLNQF
QTKVPIMVVMKAMGMQSDQEVVQMIGRDPRYGYLLLPSIEECAKSGVETQQQALEYLEKK
VKKPQFAFGLPEKENRALLILRDVFIAHVPVRNNNFRAKCLYAGVMLRRMLEAFLNKAAV
DDKDYVGNKRFELSGQLLSLLFEDLFKTMQTEVRKKVDAILIKKSRSSRFDFSQHILNNN
TISFGLERAISTGNWYAKRFRVDRKGVTQVLARLSYIQALGFLTKIQPQFEKSRKVSGPR
ALHPSQWGMLCPCDTPVGESCGLVKNLALMAHVTTDEEEGPLISLCYSLGVEDLELLSGE
ELHSSNSFLVIMNGLILGKHRRPKIFANTLRRWRRCGKTGEFVSVYENEKQCCVYIASDG
GRVCRPLVIADKGISRIKEHHMKELRDGVRTFDDFLREGLIEYLDVNEENNTLIALYDDE
AVPETTHIEIEPFTILGVIAGLIPYPHHNQSTRNTYQCAMGKQAMGNIAYNQLFRMDTLL
NLLVYPQRPLLTTKTIELVKYDNLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRC
IVMKKKSGIMQRYENNTSDRILPPKKEGYFAEKMQALDDDGIAAPGQIVRQDDILINKQT
PMVTRGSMAREIPDSQYRPTPFKQSGLAGDNSVVDRVALFSDKNDNMCINFIIRQTRRPE
VGDKFSTRHGQKGVCGTIVQQEDLVFSERGICPDLIINPHAFPSRMTVGNMIELLGGKAG
VSCGRFHYGSAFGEKSGHADKVETISETLVQHGFSYNGKDFLYSGITGEPLQAYIFMGPI
YYQKLKHMVLDKMHARGFGPRAILTRQPTEGRARNGGLRVGEMERDCLIAYGASNLIYER
LMVSSDPFQVQVCRLCGLLGYYNHKLKAGICSFCKNGDNISTLKLPYACKLLFQELQSMN
IVPRLKLADA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgactcgagattctcttcccgactctgaaaacactactaacatcatgaacaag
cagtctttaaccgctcctataaaatcaactgttgataaatataaactcattcctgagttt
ctcaagacaagagggttagtgaaggaacatttggattcttacaactactttgtgacaacg
gggattaagaagattgttcaagttaaccacgaaattcgatcctccgtggataccggcatt
tacctcaagtttaaagatgtcaaaattggtgaaccatcctttgtggcggacggcgtcgca
gaaaagatcaaccctcatcagtgcaggctgtcaaatctgacgtatgcagcacctatagaa
gttcatatagagtatgttacagatagtggtggtgaaaaggaaagacgcgagaagaaagat
gtagttctaggaaaaatgccagtaatgttacggagtcgttgttgtgttctaaatgggaag
gatgagactgagttagctaaacttggtgaatgcccacttgatcctggggggtattttatt
gtgaagggaactgaaaaggtgattatgattcaagagcaactttcaaataacaggataatc
attgaaatcgataagaagggaaatttggttgcatctgttacaagtagcactgcaacatta
aggagcaaaactgtcatagtgatggaaaaagagaagatatatctacagcttaatcaattt
cagacaaaggttcctatcatggtggtgatgaaggctatgggaatgcaaagtgaccaagaa
gttgtgcagatgattggaagagatccacgttatggttatctactcttgccttctattgag
gaatgtgccaaatctggtgtagaaacacagcagcaggcgcttgaatatctcgagaaaaag
gtcaaaaaaccacaatttgcttttggtctaccagaaaaggaaaatagagctttgttgata
cttcgggatgtatttattgcgcatgttccggtgcgtaataacaactttcgtgccaagtgt
ttatatgctggtgtgatgttgaggcgcatgttagaagctttcttaaataaagctgcagta
gatgacaaggattatgtggggaataagcggtttgaactctctggacagttactctctctt
ctttttgaggacttgtttaagacgatgcaaacagaagtcagaaaaaaggtggatgcaata
ttaattaaaaaaagcaggtcaagcagatttgatttttcccagcatatacttaataataat
accattagctttggtttagaaagagctatttcaacgggaaactggtatgctaagcggttc
agggtggatcggaaaggtgtaacacaggtgctcgctaggctgtcttacattcaggcacta
ggttttcttacaaaaattcaaccacaatttgagaagtcaaggaaagttagtggaccacgt
gctttgcatccaagccagtggggaatgctctgcccgtgtgatacacctgttggtgaatct
tgtggattggtaaagaatttggcattgatggctcatgttactactgatgaagaggaaggc
ccactaatatctttgtgttacagtttaggtgttgaagacctggagttactctctggggaa
gaactgcactcgtcaaattcatttcttgtgataatgaatggacttattcttggcaagcat
agaaggccaaagatatttgccaacactttaagaagatggcggcgttgtggaaagactggc
gagtttgtcagtgtttatgagaacgaaaagcagtgttgtgtgtatattgcgtcggatgga
ggtcgtgtctgccgccctcttgtaatagctgataaaggtatatcaaggatcaaagaacat
cacatgaaggagttgcgggatggagttcgaacctttgacgactttttgcgtgagggattg
attgagtatcttgatgtcaatgaggaaaacaataccttgattgcattgtacgatgatgaa
gccgtaccggaaacaactcatatcgaaatagagccttttacaatcttgggtgttattgct
ggcttaatcccttatccccatcacaatcagtcaaccagaaatacatatcagtgtgctatg
ggaaaacaggcaatggggaatattgcttacaatcagcttttccggatggacacattacta
aatctcttagtatatcctcaaaggcctttgctaacaacaaaaacaattgaattggtgaag
tatgacaatcttggagctggacagaatgctactgttgcagttatgagctacagtggatat
gatatagaggatgctatcgttatgaataaagcttcattggatcgtggttttggacgttgt
atagtgatgaaaaaaaagagtgggattatgcagaggtatgagaataatacatctgacaga
atccttccaccaaaaaaagaagggtatttcgccgaaaaaatgcaggcattggatgatgat
ggtattgctgctccagggcaaattgttcgacaagatgacattttgataaacaaacaaaca
ccaatggttacgaggggatcaatggcaagagagataccagatagtcagtatagacccaca
cccttcaaacaaagcggacttgctggagataattcagtggtagatcgagtggcactcttt
tctgacaagaatgacaatatgtgcataaacttcatcattcgtcaaactcgccgtcctgag
gttggcgataagtttagcaccaggcatggacagaaaggtgtatgtggtaccattgttcaa
caggaggatcttgtattctctgagcgtggcatctgccccgatctgattattaatcctcat
gcgtttccaagtcgtatgactgttggcaacatgatagaacttctgggaggaaaagctgga
gtatcatgcggaagatttcattatggaagtgcctttggagaaaaaagtggtcatgccgac
aaagttgagactataagtgagaccttagtgcagcatggattcagctacaatggaaaggat
tttctctattcaggcataactggagaacccctgcaagcatacatatttatggggccaatt
tactatcagaaattaaaacacatggtcttagataaaatgcatgcacgaggcttcggtcct
cgtgctatcttaactaggcagccaactgagggaagggctcgaaatggaggactcagggtt
ggagaaatggagcgtgattgtttgatagcttatggtgctagcaatttgatatatgagcgc
ctaatggtttcaagtgacccttttcaagttcaggtttgtagattgtgcggactgttggga
tattacaatcataaactgaaagctggtatttgtagtttttgtaaaaatggagacaacata
tccaccttgaaattgccgtatgcttgcaagctcctgtttcaggaactccaatcgatgaac
attgttccacgtttgaagttagctgatgcttga
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