Amaranthus tricolor (tampala): 130807462
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Entry
130807462 CDS
T09367
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130807462
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130807462
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130807462
03036 Chromosome and associated proteins [BR:
atri03036
]
130807462
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130807462
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130807462
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130807462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
Adaptin_N
CLASP_N
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
130807462
NCBI-ProteinID:
XP_057528651
LinkDB
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Position
3:complement(29177344..29189280)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTIDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLCTVEETCVREKAVESLCRIGSQMREN
DLVDYFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDLLKTELRSIYNQLCQDDMPMVR
RSAATNLGKFAATVEATHLKTDVMTMFEDLTQDDQDSVRLLAVESCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKDLSLDSSQHVRSALASVIMGMAPVLGKEATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNVKRLAEEFGPEWAMQHIVPQV
LEMMSNPHYLYRMTILHAISLLAPVLGSEITCSKLLPVVVTASKDRVPNIKFNVAKVLQS
LVSIVDQSVVETTIRPCLVELNEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccattgatgagcccttgtatccaattgccgttttgattgatgaattgaaaaat
gatgatatacagctacgcttgaattccattaggaggctgtctaccattgctcgtgcgctc
ggggaggagcgtactcgaaaggagttgatcccgtttcttagcgagaacaatgatgatgat
gatgaggttcttcttgcaatggcagaagaattgggtgttttcataccatatgttggtggc
gtggaatatgcccatgttctgcttccaccattggaaacactttgcaccgttgaggaaact
tgtgtaagggaaaaagctgtggagtcattgtgtcgaatcggatcccagatgagggaaaat
gatttggttgattatttcattcctttggtcaagagattggcagcaggagaatggtttaca
gctcgagtatctgcttgtggactttttcacattgcctatccaagtgccccagaccttttg
aagactgagctaagatctatatataatcagctgtgtcaagatgacatgccaatggtgaga
agatctgctgccacgaatttgggaaagtttgcagcaactgttgaagctactcatctgaag
actgacgttatgacaatgtttgaggatctaacccaagatgatcaggattctgtgcgtttg
ttagccgttgagagttgtgctgcacttggaaagttgttggagccacaagattgtgtcgca
catatacttcctgtgattgttaatttctctcaggataagtcttggcgtgtaaggtacatg
gttgccaatcaactgtatgaactttgcgaagctgttggccctgagcctacaagggcggat
ctagttcctgcatatgtgcgactacttagagacaatgaagctgaagtacgtattgctgct
gctggtaaagtaactaagttttgtcggattttgagccctgagctggccatccaacatatt
ctgccatgtgttaaggacttgtcattagattcttctcaacatgttcgctctgctttggct
tctgttataatgggaatggctcctgttttgggaaaggaagctacaattgagcaccttctt
cccatttttctttccctgttgaaggatgaatttccagatgttcgccttaatataatcagc
aagcttgatcaagtgaatcaggttatcggtattgatttattgtctcaatccctcttgccc
gccattgtcgagcttgctgaagatagacattggagagttcgacttgcgataattgagtac
atacctttacttgcaagccagcttggggttggattttttgatgataaacttggtgcccta
tgcatgcagtggttacaggataaggtgtactctattcgtgatgctgctgctaataatgtg
aagcgccttgcagaagaatttggtcctgagtgggccatgcagcacattgttccacaggtt
ttggagatgatgagtaatccgcactatttgtataggatgacaattttgcatgccatttct
ttacttgctcctgtcttgggttctgagattacgtgctctaaactgttgccagttgtggtt
actgcctcgaaagacagggttccgaacataaagttcaatgtggcaaaggtgctgcaatct
cttgtatcaatagttgatcaatctgtagttgaaacaacaattcgtccgtgtttagtcgag
ttgaatgaggatcctgatgttgatgttcgtttcttcgcaaaccaagcgctccagtcaatt
gataatgtgatgatgtctagttaa
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