Amaranthus tricolor (tampala): 130812587
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Entry
130812587 CDS
T09367
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00900
Terpenoid backbone biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130812587
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atri01006
]
130812587
Enzymes [BR:
atri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130812587
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130812587
Prenyltransferases [BR:
atri01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130812587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
FAINT
Motif
Other DBs
NCBI-GeneID:
130812587
NCBI-ProteinID:
XP_057534086
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All DBs
Position
5:complement(20235300..20248683)
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AA seq
343 aa
AA seq
DB search
MDVEQEEKERFQQVYEVLKKDVLEDPAFEHDDVSLQWVQQMMDYNVPGGKQSRAMLVIES
LKRLKDGKPVSEEEFFRASVMGWCIQWAMASALMQDDIVDNSNMRRGKPCWFRLPKVGLI
ALNDSTLLGCQAGRIAKKHFRDQPYYRDYVDLISEIGFQTISGQMIDLITEGEKDIWQFN
MTLHQRISLYKTAYGTTYLPFACALLMLGEKVEDFVDAKDILLEMGIYFQVQDDYLDCFG
DPEKMGKVGTDIEESKCSWLVVKALELCDEEQKKILVENYMKSDQESVAIVKCLYKDLNL
EGVYAEYEANLYEKLIGRIEAIPNTNVRKLLKSYLDKIYLRQK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaacaggaagagaaagaaagatttcaacaagtctatgaagtgctcaagaaa
gatgtgctcgaagatcctgcatttgagcatgatgatgtatctcttcaatgggtccaacag
atgatggattacaatgttcctggaggaaaacaaagcagggcaatgcttgtgattgaaagc
ttgaagcgcttaaaagacggaaaaccagtttctgaagaggagttttttcgtgcttccgtt
atgggctggtgtattcaatgggcaatggcaagtgctcttatgcaagatgatatagtggac
aattccaacatgaggcgcggcaagccttgttggtttagattacccaaggttggcttgatt
gctttaaatgatagcacactacttgggtgtcaagctggtagaattgctaagaaacacttt
cgagaccagccttactatagagattatgttgatttaataagtgagattgggttccaaaca
atttctggacaaatgattgatcttattactgaaggggagaaagatatatggcaatttaat
atgacactgcatcaacgcatcagcctctacaagacagcatatggaacaacttatcttccg
tttgcatgcgcactacttatgttgggagagaaggtagaggattttgttgatgccaaggac
attctacttgagatggggatttactttcaagtacaggatgattatttagactgctttggt
gatcctgaaaagatgggcaaggtgggaacagatattgaagaatccaaatgttcttggttg
gtcgtgaaagctttagaactttgtgatgaggagcagaagaaaatattagttgaaaattat
atgaagtcggatcaagaaagtgttgctatagtgaaatgtctctataaagatcttaatctt
gagggtgtgtacgctgaatacgaagcaaatttgtacgagaagctaattggccgtattgaa
gctatcccaaacacaaatgtgagaaaattgttgaagtcttacttggataaaatatacttg
aggcagaaatag
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